RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 SLC38A5Q8WUX1 472 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 TRMT2BQ96GJ1 504 aaKnown RBP11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 NRTNQ99748 197 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 TM9SF2Q99805 663 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 RACGAP1Q9H0H5 632 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 IRF2BPLQ9H1B7 796 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 FAM83DQ9H4H8 585 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 RPRD1BQ9NQG5 326 aaKnown RBP11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 SPIN1Q9Y657 262 aaPredicted RBP11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 ADAP00813 363 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 CKMP06732 381 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 CTSAP10619 480 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 SNRPD2P62316 118 aaKnown RBP11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 MLLT11Q13015 90 aaPredicted RBP11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 ILKQ13418 452 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 NCF4Q15080 339 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 DCST1Q5T197 706 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 BRAT1Q6PJG6 821 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 SHFQ7M4L6 423 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 C2orf73Q8N5S3 287 aaPredicted RBP11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 YIPF7Q8N8F6 280 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 BTN2A2Q8WVV5 523 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 TM9SF4Q92544 642 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 TMEM19Q96HH6 336 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 FRMD6Q96NE9 622 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 SLA2Q9H6Q3 261 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 ELAC1Q9H777 363 aaKnown RBP11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 ACOXLQ9NUZ1 547 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 KCNE2Q9Y6J6 123 aa11.15□□□□□ -0.62
PDZRN3-203ENST00000462146 PIPSLA2A3N6 862 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 B4GALT2O60909 372 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 LATS1O95835 1130 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 IFNA14P01570 189 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 CATP04040 527 aaKnown RBP11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 NPPBP16860 134 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 HTR2BP41595 481 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 TARDBPQ13148 414 aaKnown RBP eCLIP11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 ELOAQ14241 798 aaKnown RBP11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 HEPACAMQ14CZ8 416 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 P2RY14Q15391 338 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 TMEM201Q5SNT2 666 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 MEDAGQ5VYS4 303 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 REEP3Q6NUK4 255 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 XKRXQ6PP77 449 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 FIBINQ8TAL6 211 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 SLC7A13Q8TCU3 470 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 CXorf40BQ96DE9 158 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 METTL2AQ96IZ6 378 aaKnown RBP11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 MSLNLQ96KJ4 702 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 POLR2J3Q9H1A7 115 aaKnown RBP11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 MTG2Q9H4K7 406 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 IL21Q9HBE4 155 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 CTPS2Q9NRF8 586 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 ENOPH1Q9UHY7 261 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 TMCC3Q9ULS5 477 aa11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 RPL36Q9Y3U8 105 aaKnown RBP11.15□□□□□ -0.63
PDZRN3-203ENST00000462146 ARRDC5A6NEK1 342 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 RTCAO00442 366 aaKnown RBP11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 POLR1CO15160 346 aaPredicted RBP11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 ALPPP05187 535 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 CCNYL3P0C7X3 344 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 MAN2A2P49641 1150 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 PIN1Q13526 163 aaPredicted RBP11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 NFE2L1Q14494 772 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 GDPGP1Q6ZNW5 385 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 PDZD3Q86UT5 571 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 TRIM69Q86WT6 500 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 PROKR2Q8NFJ6 384 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 OR52P1PQ8NH57 321 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 OTUB1Q96FW1 271 aaPredicted RBP11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 DHRS1Q96LJ7 313 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 DCLRE1CQ96SD1 692 aaKnown RBP11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 MCOLN1Q9GZU1 580 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 COMMD3Q9UBI1 195 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 GULP1Q9UBP9 304 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 NDOR1Q9UHB4 597 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 CLCA3PQ9Y6N3 262 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 LRRK1Q38SD2 2015 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 ANKDD1BA6NHY2 528 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 AKR7A2O43488 359 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 NCR1O76036 304 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 URODP06132 367 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 TRAPPC2P0DI81 140 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 TRAPPC2BP0DI82 140 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 POLR2EP19388 210 aaKnown RBP11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 GSTM5P46439 218 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 TATDN3Q17R31 274 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 ACSM5Q6NUN0 579 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 RNF180Q86T96 592 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 CRIPAKQ8N1N5 446 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 ENKURQ8TC29 256 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 GATAD2BQ8WXI9 593 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 TMEM169Q96HH4 297 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 CITED4Q96RK1 184 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 GPA33Q99795 319 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 TMEM175Q9BSA9 504 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 KATNB1Q9BVA0 655 aa11.14□□□□□ -0.63
PDZRN3-203ENST00000462146 BACE2Q9Y5Z0 518 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms