RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 GTF2H2CQ6P1K8 395 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 CYP20A1Q6UW02 462 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 DGAT2L6Q6ZPD8 337 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 ACAD11Q709F0 780 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 ST13P4Q8IZP2 240 aaPredicted RBP19.44■□□□□ 0.7
VSX1-206ENST00000444511 RPRMLQ8N4K4 120 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 OR5M9Q8NGP3 310 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 C14orf79Q96F83 325 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 PELOQ9BRX2 385 aaKnown RBP19.44■□□□□ 0.7
VSX1-206ENST00000444511 CNPPD1Q9BV87 410 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 IPPKQ9H8X2 491 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 PNPLA3Q9NST1 481 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 LIPGQ9Y5X9 500 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 IQANK1A0A1B0GTG1 560 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 ATP6AP2A0A1C7CYW4 349 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 OR14I1A6ND48 311 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 FAM90A27PA6NNH2 459 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 HRKO00198 91 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 BCKDKO14874 412 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 PROM1O43490 865 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 KLK8O60259 260 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 ATP6AP2O75787 350 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 IGHG3P01860 377 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 NR2F6P10588 404 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 ARL1P40616 181 aaPredicted RBP19.43■□□□□ 0.7
VSX1-206ENST00000444511 PMPCAQ10713 525 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 CUL3Q13618 768 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 SLC29A4Q7RTT9 530 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 GOLGA7Q7Z5G4 137 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 LILRB4Q8NHJ6 448 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 DOK4Q8TEW6 326 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 VPS11Q9H270 941 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 WDR41Q9HAD4 459 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 ZDHHC18Q9NUE0 388 aa19.43■□□□□ 0.7
VSX1-206ENST00000444511 TUBA8Q9NY65 449 aaPredicted RBP19.43■□□□□ 0.7
VSX1-206ENST00000444511 CACNA1CQ13936 2221 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 GLOD5A6NK44 160 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 FIGNL2A6NMB9 653 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 EEDO75530 441 aaKnown RBP19.42■□□□□ 0.7
VSX1-206ENST00000444511 SIX3O95343 332 aaPredicted RBP19.42■□□□□ 0.7
VSX1-206ENST00000444511 GPR75O95800 540 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 ALDOAP04075 364 aaKnown RBP19.42■□□□□ 0.7
VSX1-206ENST00000444511 FAM58BPP0C7Q3 252 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 BSGP35613 385 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 PIGAP37287 484 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 NUP107P57740 925 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 HERVK_113P63132 956 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 ERVK-8P63133 956 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 TLE4Q04727 773 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 FOXO1Q12778 655 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 ZNF267Q14586 743 aaPredicted RBP19.42■□□□□ 0.7
VSX1-206ENST00000444511 HYAL4Q2M3T9 481 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 ZNF791Q3KP31 576 aaPredicted RBP19.42■□□□□ 0.7
VSX1-206ENST00000444511 SLC22A10Q63ZE4 541 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 MRM1Q6IN84 353 aaKnown RBP19.42■□□□□ 0.7
VSX1-206ENST00000444511 ZNF585AQ6P3V2 769 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 RNF111Q6ZNA4 994 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 TRILQ7L0X0 811 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 NUDT13Q86X67 352 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 CCDC71Q8IV32 467 aaPredicted RBP19.42■□□□□ 0.7
VSX1-206ENST00000444511 SLC15A4Q8N697 577 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 L3MBTL4Q8NA19 623 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 ACBD4Q8NC06 268 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 SPACA9Q96E40 222 aaPredicted RBP19.42■□□□□ 0.7
VSX1-206ENST00000444511 GPR78Q96P69 363 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 GAL3ST4Q96RP7 486 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 LRRC1Q9BTT6 524 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 ERVK-6Q9BXR3 956 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 ZNF717Q9BY31 904 aaPredicted RBP19.42■□□□□ 0.7
VSX1-206ENST00000444511 LDAHQ9H6V9 325 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 DDX31Q9H8H2 851 aaKnown RBP19.42■□□□□ 0.7
VSX1-206ENST00000444511 KCNJ16Q9NPI9 418 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 ERVK-19Q9WJR5 959 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 RNF11Q9Y3C5 154 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 ASB4Q9Y574 426 aa19.42■□□□□ 0.7
VSX1-206ENST00000444511 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.42■□□□□ 0.7
VSX1-206ENST00000444511 A0A0A6YYD5 115 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 A0A1W2PR48 441 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 NKX2-6A6NCS4 301 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 TMPRSS11DO60235 418 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 CLDN9O95484 217 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 NADKO95544 446 aaPredicted RBP19.41■□□□□ 0.7
VSX1-206ENST00000444511 ACVR2AP27037 513 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 MAN2A2P49641 1150 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 NEK2P51955 445 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 KCNJ2P63252 427 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 TBL3Q12788 808 aaKnown RBP19.41■□□□□ 0.7
VSX1-206ENST00000444511 SLC10A1Q14973 349 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 SPRED3Q2MJR0 410 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 METTL2BQ6P1Q9 378 aaKnown RBP19.41■□□□□ 0.7
VSX1-206ENST00000444511 RIT1Q92963 219 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 ATP6V1E2Q96A05 226 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 TREX2Q9BQ50 279 aaPredicted RBP19.41■□□□□ 0.7
VSX1-206ENST00000444511 UCK2Q9BZX2 261 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 ACSS3Q9H6R3 686 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 EXO5Q9H790 373 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 SEMA4BQ9NPR2 832 aaPredicted RBP19.41■□□□□ 0.7
VSX1-206ENST00000444511 PSD3Q9NYI0 1048 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 NINJ2Q9NZG7 142 aa19.41■□□□□ 0.7
VSX1-206ENST00000444511 ITGB1BP2Q9UKP3 347 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms