RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 IL22Q9GZX6 179 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 VCX3BQ9H321 246 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 UBTD1Q9HAC8 227 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 UFSP2Q9NUQ7 469 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 TMEM74BQ9NUR3 256 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 ASIC5Q9NY37 505 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 PTTG2Q9NZH5 202 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 C1RLQ9NZP8 487 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 ZNF639Q9UID6 485 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 VANGL2Q9ULK5 521 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 ZNF490Q9ULM2 529 aaPredicted RBP4.58□□□□□ -1.68
GABPB1-204ENST00000396464 TTC7AQ9ULT0 858 aaPredicted RBP4.58□□□□□ -1.68
GABPB1-204ENST00000396464 ADAMTS5Q9UNA0 930 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 SBNO1A3KN83 1393 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 MROH2BQ7Z745 1585 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 A0A1B0GVL5 298 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 ESYT2A0FGR8 921 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 MANSC4A6NHS7 340 aaPredicted RBP4.57□□□□□ -1.68
GABPB1-204ENST00000396464 NBR2O15453 112 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 KCNN4O15554 427 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 CLN5O75503 358 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 TSPAN12O95859 305 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 MT-CO3P00414 261 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 FTH1P02794 183 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 PLEKP08567 350 aaPredicted RBP4.57□□□□□ -1.68
GABPB1-204ENST00000396464 SRD5A2P31213 254 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 NKX2-1P43699 371 aaPredicted RBP4.57□□□□□ -1.68
GABPB1-204ENST00000396464 CCT3P49368 545 aaKnown RBP4.57□□□□□ -1.68
GABPB1-204ENST00000396464 SLC26A2P50443 739 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 ARHGDIAP52565 204 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 PGGT1BP53609 377 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 CD81P60033 236 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 EXOSC2Q13868 293 aaKnown RBP4.57□□□□□ -1.68
GABPB1-204ENST00000396464 CEP78Q5JTW2 689 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 LIPNQ5VXI9 398 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 CLEC6AQ6EIG7 209 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 TMEM65Q6PI78 240 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 KCNIP4Q6PIL6 250 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 CENPUQ71F23 418 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 COPS6Q7L5N1 327 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 C12orf56Q8IXR9 622 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 LRRC57Q8N9N7 239 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 OR4C5Q8NGB2 326 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 OR4A15Q8NGL6 344 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 M1APQ8TC57 530 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 SCARB1Q8WTV0 552 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 SMPDL3BQ92485 455 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 ELMO1Q92556 727 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 OTULINQ96BN8 352 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 TM4SF19Q96DZ7 209 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 MTERF3Q96E29 417 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 PBKQ96KB5 322 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 VSTM2LQ96N03 204 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 TSNARE1Q96NA8 513 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 OMDQ99983 421 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 BTBD10Q9BSF8 475 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 UBAC1Q9BSL1 405 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 HAUS8Q9BT25 410 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 RBM24Q9BX46 236 aaKnown RBP4.57□□□□□ -1.68
GABPB1-204ENST00000396464 TEKT3Q9BXF9 490 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 ROGDIQ9GZN7 287 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 NPFFR1Q9GZQ6 430 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 MFFQ9GZY8 342 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 SPRTNQ9H040 489 aaPredicted RBP4.57□□□□□ -1.68
GABPB1-204ENST00000396464 SEMA6AQ9H2E6 1030 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 FOXP1Q9H334 677 aaPredicted RBP4.57□□□□□ -1.68
GABPB1-204ENST00000396464 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.57□□□□□ -1.68
GABPB1-204ENST00000396464 TESQ9UGI8 421 aaKnown RBP4.57□□□□□ -1.68
GABPB1-204ENST00000396464 ADAM28Q9UKQ2 775 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 ZNF346Q9UL40 294 aaKnown RBP4.57□□□□□ -1.68
GABPB1-204ENST00000396464 SATB2Q9UPW6 733 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 ERVK-19Q9WJR5 959 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 RAP2CQ9Y3L5 183 aa4.57□□□□□ -1.68
GABPB1-204ENST00000396464 A0A1B0GUH1 482 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 WDR27A2RRH5 827 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 HYKKA2RU49 373 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 LRRIQ3A6PVS8 624 aaPredicted RBP4.56□□□□□ -1.68
GABPB1-204ENST00000396464 C17orf105B2RV13 164 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 B4DGG1 531 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 FAM90A26D6RGX4 464 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 NPIPA3F8WFD2 350 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 H0YIZ8 118 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 M0R296 226 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 HSPB6O14558 160 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 BCKDKO14874 412 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 HDAC3O15379 428 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 SNX3O60493 162 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 JAK2O60674 1132 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 NDUFA7O95182 113 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 F7P08709 466 aaPredicted RBP4.56□□□□□ -1.68
GABPB1-204ENST00000396464 MCF2P10911 925 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 IRF2P14316 349 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 ZNF24P17028 368 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 CD58P19256 250 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 NT5EP21589 574 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 LAP3P28838 519 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 CSTF2P33240 577 aaKnown RBP eCLIP4.56□□□□□ -1.68
GABPB1-204ENST00000396464 CYLC1P35663 651 aaPredicted RBP4.56□□□□□ -1.68
GABPB1-204ENST00000396464 PIGAP37287 484 aa4.56□□□□□ -1.68
GABPB1-204ENST00000396464 CDH6P55285 790 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms