RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 ZNF358Q9NW07 568 aa16.43■□□□□ 0.22
HDDC3-201ENST00000330334 PCTPQ9UKL6 214 aa16.43■□□□□ 0.22
HDDC3-201ENST00000330334 A0A087WUV0 522 aaPredicted RBP16.42■□□□□ 0.22
HDDC3-201ENST00000330334 A0A1W2PR48 441 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 KIF2AO00139 706 aaPredicted RBP16.42■□□□□ 0.22
HDDC3-201ENST00000330334 TMPRSS11DO60235 418 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 SMIM24O75264 130 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 EEDO75530 441 aaKnown RBP16.42■□□□□ 0.22
HDDC3-201ENST00000330334 CLDN14O95500 239 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 RFC3P40938 356 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 NEK2P51955 445 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 CCNG1P51959 295 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 PPIAP62937 165 aaKnown RBP16.42■□□□□ 0.22
HDDC3-201ENST00000330334 HYAL4Q2M3T9 481 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 GGTA1PQ4G0N0 100 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 FRG2Q64ET8 278 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 CYP20A1Q6UW02 462 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 GK5Q6ZS86 529 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 SLC22A16Q86VW1 577 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 NUDT13Q86X67 352 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 DND1Q8IYX4 353 aaKnown RBP16.42■□□□□ 0.22
HDDC3-201ENST00000330334 MYRIPQ8NFW9 859 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 OR52B6Q8NGF0 335 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 OR52N2Q8NGI0 321 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 ZNF592Q92610 1267 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 ATP6V1E2Q96A05 226 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 PPWD1Q96BP3 646 aaKnown RBP16.42■□□□□ 0.22
HDDC3-201ENST00000330334 PHF21BQ96EK2 531 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 FRG2BQ96QU4 278 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 FAM173AQ9BQD7 235 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 WDR41Q9HAD4 459 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 ZBTB26Q9HCK0 441 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 XPR1Q9UBH6 696 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 ADAM29Q9UKF5 820 aa16.42■□□□□ 0.22
HDDC3-201ENST00000330334 ACOT7O00154 380 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 ZNF354AO60765 605 aaPredicted RBP16.41■□□□□ 0.22
HDDC3-201ENST00000330334 SNRPAP09012 282 aaKnown RBP16.41■□□□□ 0.22
HDDC3-201ENST00000330334 SLC35E2P0CK97 266 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 NR2F6P10588 404 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 PRF1P14222 555 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 ZNF750Q32MQ0 723 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 ZNF791Q3KP31 576 aaPredicted RBP16.41■□□□□ 0.22
HDDC3-201ENST00000330334 LGSNQ5TDP6 509 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 TIFABQ6ZNK6 161 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 DGAT2L6Q6ZPD8 337 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 C9orf40Q8IXQ3 194 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 CNPY4Q8N129 248 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 TMEM151AQ8N4L1 468 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 SLC22A8Q8TCC7 542 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 RIT1Q92963 219 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 C1QTNF3Q9BXJ4 246 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 MRPL46Q9H2W6 279 aaKnown RBP16.41■□□□□ 0.22
HDDC3-201ENST00000330334 IL1RL2Q9HB29 575 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 SH2D2AQ9NP31 389 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 SACM1LQ9NTJ5 587 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 AHSPQ9NZD4 102 aa16.41■□□□□ 0.22
HDDC3-201ENST00000330334 IQANK1A0A1B0GTG1 560 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 PINLYPA6NC86 204 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 OR14I1A6ND48 311 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 OR6C76A6NM76 312 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 TRIM49D1C9J1S8 452 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 IGHG3P01860 377 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 P04436 131 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 ABHD2P08910 425 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 FOXO1Q12778 655 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 ASPHQ12797 758 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 TRAF3Q13114 568 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 TMEM211Q6ICI0 200 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 PAGE2Q7Z2X7 111 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 LCA5Q86VQ0 697 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 MCEMP1Q8IX19 187 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 TRPC4APQ8TEL6 797 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 MTFMTQ96DP5 389 aaKnown RBP16.4■□□□□ 0.22
HDDC3-201ENST00000330334 CDK15Q96Q40 435 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 TTTY12Q9BZ98 90 aa16.4■□□□□ 0.22
HDDC3-201ENST00000330334 TP63Q9H3D4 680 aaPredicted RBP16.4■□□□□ 0.22
HDDC3-201ENST00000330334 DCHS2Q6V1P9 2916 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 PKDREJQ9NTG1 2253 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 A0A1B0GVC2 190 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 ENO4A6NNW6 628 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 POC1B-GALNT4F8VUJ3 575 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 HRKO00198 91 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 ZNHIT1O43257 154 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 OR10H2O60403 315 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 CDC40O60508 579 aaKnown RBP eCLIP16.39■□□□□ 0.21
HDDC3-201ENST00000330334 PRKRAO75569 313 aaKnown RBP16.39■□□□□ 0.21
HDDC3-201ENST00000330334 NADKO95544 446 aaPredicted RBP16.39■□□□□ 0.21
HDDC3-201ENST00000330334 AIFM1O95831 613 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 OTCP00480 354 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 TPOP07202 933 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 RPS17P08708 135 aaKnown RBP16.39■□□□□ 0.21
HDDC3-201ENST00000330334 SLC37A1P57057 533 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 PLGLB1Q02325 96 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 IFT88Q13099 833 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 SLC22A10Q63ZE4 541 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 OR52E8Q6IFG1 317 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 LYPD8Q6UX82 237 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 SLC29A4Q7RTT9 530 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 MILR1Q7Z6M3 343 aa16.39■□□□□ 0.21
HDDC3-201ENST00000330334 CD163Q86VB7 1156 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms