RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 OR52E8Q6IFG1 317 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 SLC48A1Q6P1K1 146 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 KRTCAP2Q8N6L1 136 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 CCDC197Q8NCU1 140 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 DNAJB14Q8TBM8 379 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 CT55Q8WUE5 264 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 TANKQ92844 425 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 GFM2Q969S9 779 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 MIEF2Q96C03 454 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 SPSB2Q99619 263 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 RBCK1Q9BYM8 510 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 MIEF1Q9NQG6 463 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 TAS2R7Q9NYW3 318 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 ATP6V1HQ9UI12 483 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 CROTQ9UKG9 612 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 CES1P1Q9UKY3 287 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 MMACHCQ9Y4U1 282 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 LOC400499M0QZD8 3231 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 C21orf140B9A014 251 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 CLDN4O14493 209 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 TERTO14746 1132 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 SCAMP2O15127 329 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 PGRMC2O15173 223 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 AKAP10O43572 662 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 B4GALT2O60909 372 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 WT1P19544 449 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 CLNS1AP54105 237 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 HSD17B7P56937 341 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 ERV3-1Q14264 604 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 QSOX2Q6ZRP7 698 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 R3HCC1LQ7Z5L2 792 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 GLB1L3Q8NCI6 653 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 UCN3Q969E3 161 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 TESCQ96BS2 214 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 TEX37Q96LM6 180 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 NMUR2Q9GZQ4 415 aa18.65■□□□□ 0.58
PDLIM2-221ENST00000622702 PTPRQQ9UMZ3 2332 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 GLOD5A6NK44 160 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 CTNSO60931 367 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 SLC22A3O75751 556 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 CYC1P08574 325 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 DDX5P17844 614 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 F8A1P23610 371 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 PPP2R1BP30154 601 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 ADSLP30566 484 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 ALDH9A1P49189 494 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 NME5P56597 212 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 ACTN3Q08043 901 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 VAC14Q08AM6 782 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 UGT8Q16880 541 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 CAMKMTQ7Z624 323 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 TICAM1Q8IUC6 712 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 SCUBE1Q8IWY4 988 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 SLC45A3Q96JT2 553 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 GPR87Q9BY21 358 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 CLMPQ9H6B4 373 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 PRTFDC1Q9NRG1 225 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 IL17BQ9UHF5 180 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 PSME2Q9UL46 239 aa18.64■□□□□ 0.57
PDLIM2-221ENST00000622702 MGAQ8IWI9 3026 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 GABRR3A8MPY1 467 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 FCHO1O14526 889 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 CDC123O75794 336 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 KLF7O75840 302 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 RECKO95980 971 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 RHAGQ02094 409 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 DNASE1L3Q13609 305 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 DPY19L1Q2PZI1 675 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 MINDY4Q4G0A6 757 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 PAOXQ6QHF9 649 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 MTDHQ86UE4 582 aaKnown RBP18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 LAPTM4BQ86VI4 370 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 ENDOVQ8N8Q3 282 aaKnown RBP18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 PLPP5Q8NEB5 264 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 PPCDCQ96CD2 204 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 COQ8BQ96D53 544 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 ZBTB18Q99592 522 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 PRPF18Q99633 342 aaKnown RBP18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 EFHD1Q9BUP0 239 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 VN1R1Q9GZP7 353 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 MYLK2Q9H1R3 596 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 PRORYQ9H606 182 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 PADI2Q9Y2J8 665 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 CLDN16Q9Y5I7 305 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 NUP210LQ5VU65 1888 aa18.63■□□□□ 0.57
PDLIM2-221ENST00000622702 SCN2AQ99250 2005 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 WASHC1A8K0Z3 465 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 K7ENP7 123 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 SLC22A2O15244 555 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 DCTN3O75935 186 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 COX7A2P14406 83 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 IL12AP29459 219 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 RPS15P62841 145 aaKnown RBP18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 BTG2P78543 158 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 IGLV3-21P80748 117 aaPredicted RBP18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 SLC13A2Q13183 592 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 INO80CQ6PI98 192 aaPredicted RBP18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 PRSS58Q8IYP2 241 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 ZSCAN1Q8NBB4 408 aa18.62■□□□□ 0.57
PDLIM2-221ENST00000622702 C7orf57Q8NEG2 295 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms