RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 PRAMEF12O95522 483 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 TSHBP01222 138 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 RRASP10301 218 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 TNNI3P19429 210 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 HNRNPA2B1P22626 353 aaKnown RBP4.83□□□□□ -1.64
LINC00458-206ENST00000607494 IL4RP24394 825 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 CTNNA2P26232 953 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 MFGE8Q08431 387 aaPredicted RBP4.83□□□□□ -1.64
LINC00458-206ENST00000607494 HSPA14Q0VDF9 509 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 CNTN1Q12860 1018 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 SGCGQ13326 291 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 MEF2DQ14814 521 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 TMEM132DQ14C87 1099 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 EXOSC7Q15024 291 aaKnown RBP4.83□□□□□ -1.64
LINC00458-206ENST00000607494 MAJINQ3KP22 176 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 TECRLQ5HYJ1 363 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 RFPL4BQ6ZWI9 263 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 CENPLQ8N0S6 344 aaPredicted RBP4.83□□□□□ -1.64
LINC00458-206ENST00000607494 ZNF843Q8N446 348 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 FADS6Q8N9I5 356 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 CCDC197Q8NCU1 140 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 TMEM45BQ96B21 275 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 RAB33BQ9H082 229 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 SLC26A1Q9H2B4 701 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 ATAD3AQ9NVI7 634 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 GTSE1Q9NYZ3 720 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 HACD3Q9P035 362 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 ERVK-18Q9QC07 812 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 DBF4Q9UBU7 674 aaPredicted RBP4.83□□□□□ -1.64
LINC00458-206ENST00000607494 SNX6Q9UNH7 406 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 MYH14Q7Z406 1995 aaKnown RBP4.83□□□□□ -1.64
LINC00458-206ENST00000607494 SMARCA4P51532 1647 aa4.83□□□□□ -1.64
LINC00458-206ENST00000607494 IGHV4-61A0A0C4DH41 118 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 TRBV4-1A0A0J9YWV2 114 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 A0A0U1RQV5 110 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 SRRM4A7MD48 611 aaKnown RBP4.82□□□□□ -1.64
LINC00458-206ENST00000607494 LGALS8O00214 317 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 ARPC1BO15143 372 aaKnown RBP4.82□□□□□ -1.64
LINC00458-206ENST00000607494 MAPK13O15264 365 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 CSO75390 466 aaKnown RBP4.82□□□□□ -1.64
LINC00458-206ENST00000607494 IGHV4-59P01825 116 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 EPB41P11171 864 aaKnown RBP4.82□□□□□ -1.64
LINC00458-206ENST00000607494 MARK3P27448 753 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 CEACAM8P31997 349 aaPredicted RBP4.82□□□□□ -1.64
LINC00458-206ENST00000607494 DCDC1P59894 354 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 CHIT1Q13231 466 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 NME3Q13232 169 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 SRSF9Q13242 221 aaKnown RBP eCLIP4.82□□□□□ -1.64
LINC00458-206ENST00000607494 SNTB2Q13425 540 aaKnown RBP4.82□□□□□ -1.64
LINC00458-206ENST00000607494 OR1C1Q15619 314 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 ZKSCAN8Q15776 578 aaPredicted RBP4.82□□□□□ -1.64
LINC00458-206ENST00000607494 DUSP5Q16690 384 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 ADPRMQ3LIE5 342 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 NADK2Q4G0N4 442 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 ATAD3BQ5T9A4 648 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 LIPJQ5W064 366 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 RTL6Q6ICC9 239 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 CAPN13Q6MZZ7 669 aaPredicted RBP4.82□□□□□ -1.64
LINC00458-206ENST00000607494 C19orf48Q6RUI8 117 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 CES3Q6UWW8 571 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 TMEM207Q6UWW9 146 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 ELMOD1Q8N336 334 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 MARVELD2Q8N4S9 558 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 OR52M1Q8NGK5 317 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 OR1L3Q8NH93 324 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 MAGED4Q96JG8 741 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 IL12RB2Q99665 862 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 POLR1EQ9GZS1 481 aaKnown RBP4.82□□□□□ -1.64
LINC00458-206ENST00000607494 RMND5AQ9H871 391 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 SLC52A3Q9NQ40 469 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 TAAR2Q9P1P5 351 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 POMT2Q9UKY4 750 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 CHMP2BQ9UQN3 213 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 ATG4BQ9Y4P1 393 aa4.82□□□□□ -1.64
LINC00458-206ENST00000607494 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.82□□□□□ -1.64
LINC00458-206ENST00000607494 A0A087WUV0 522 aaPredicted RBP4.81□□□□□ -1.64
LINC00458-206ENST00000607494 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 YJEFN3A6XGL0 299 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 PDXKO00764 312 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 CCSO14618 274 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 P2RX6O15547 441 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 ECE2O60344 883 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 AMBPP02760 352 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 PAICSP22234 425 aaKnown RBP4.81□□□□□ -1.64
LINC00458-206ENST00000607494 GPX3P22352 226 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 FCGR2BP31994 310 aaPredicted RBP4.81□□□□□ -1.64
LINC00458-206ENST00000607494 ADRA1AP35348 466 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 LBX1P52954 281 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 LIMK2P53671 638 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 LINC01547P58512 204 aaPredicted RBP4.81□□□□□ -1.64
LINC00458-206ENST00000607494 DRP2Q13474 957 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 GPM6BQ13491 265 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 BTG3Q14201 252 aaPredicted RBP4.81□□□□□ -1.64
LINC00458-206ENST00000607494 P2RY6Q15077 328 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 ZNF74Q16587 644 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 SLC36A3Q495N2 470 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 LIPKQ5VXJ0 399 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 CENPPQ6IPU0 288 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 CDC42EP5Q6NZY7 148 aa4.81□□□□□ -1.64
LINC00458-206ENST00000607494 LEKR1Q6ZMV7 388 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms