RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SPHK1Q9NYA1 384 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 CIDEBQ9UHD4 219 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 TAC3Q9UHF0 121 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 SLC22A14Q9Y267 594 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 ANGPTL3Q9Y5C1 460 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 DMXL1Q9Y485 3027 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 ADAMTS9Q9P2N4 1935 aa5.48□□□□□ -1.53
SCAF11-213ENST00000550629 ZFC3H1O60293 1989 aaKnown RBP5.47□□□□□ -1.53
SCAF11-213ENST00000550629 FAM186AA6NE01 2351 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 IGHV5-10-1A0A0J9YXX1 117 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 TRBC2A0A5B9 178 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 OR2A25A4D2G3 310 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 KRT87PA6NCN2 255 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 MARCH11A6NNE9 402 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 CLGNO14967 610 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 CCNT2O60583 730 aaKnown RBP5.47□□□□□ -1.53
SCAF11-213ENST00000550629 SIX3O95343 332 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-213ENST00000550629 CLDN9O95484 217 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 ESRRBO95718 433 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 SERPINE1P05121 402 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 ENO1P06733 434 aaKnown RBP5.47□□□□□ -1.53
SCAF11-213ENST00000550629 FTH1P19P0C7X4 201 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 EBLN1P0CF75 366 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 C1GALT1C1LP0DN25 315 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 THRAP10827 490 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 NELFEP18615 380 aaKnown RBP5.47□□□□□ -1.53
SCAF11-213ENST00000550629 EPORP19235 508 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 CDH3P22223 829 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 SLC6A2P23975 617 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 HNF4AP41235 474 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 GRIA3P42263 894 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 NOVA1P51513 510 aaKnown RBP5.47□□□□□ -1.53
SCAF11-213ENST00000550629 SIM1P81133 766 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-213ENST00000550629 CFHR1Q03591 330 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 ZNF33BQ06732 778 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 EIF3IQ13347 325 aaKnown RBP5.47□□□□□ -1.53
SCAF11-213ENST00000550629 GTF2H2Q13888 395 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 RCN2Q14257 317 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 GGTA1PQ4G0N0 100 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 NKAIN2Q5VXU1 208 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 LIPJQ5W064 366 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 ATG16L1Q676U5 607 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 ZNF425Q6IV72 752 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 IRGCQ6NXR0 463 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 GTF2H2CQ6P1K8 395 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 ZNF529Q6P280 563 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 SUSD1Q6UWL2 747 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 RGS9BPQ6ZS82 235 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 SEM1Q6ZVN7 128 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 GOLGA7Q7Z5G4 137 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 PAQR7Q86WK9 346 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 TMPRSS12Q86WS5 348 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 KRT78Q8N1N4 520 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 TEX9Q8N6V9 391 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 CCNYL1Q8N7R7 359 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 DCBLD1Q8N8Z6 715 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 ANKRD42Q8N9B4 389 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 SNX31Q8N9S9 440 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 L3MBTL4Q8NA19 623 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 PPFIBP2Q8ND30 876 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 BEND2Q8NDZ0 799 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 TTLQ8NG68 377 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 OR8K5Q8NH50 307 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 FAM76AQ8TAV0 307 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 JPH3Q8WXH2 748 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-213ENST00000550629 JADE3Q92613 823 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 NEIL2Q969S2 332 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 PYCR2Q96C36 320 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 REPS1Q96D71 796 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 PHF21BQ96EK2 531 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 TGM7Q96PF1 710 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 TRAPPC9Q96Q05 1148 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 TMEM237Q96Q45 408 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 AIF1LQ9BQI0 150 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 NUDT22Q9BRQ3 303 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 DPH7Q9BTV6 452 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 NTMT1Q9BV86 223 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 GATA5Q9BWX5 397 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-213ENST00000550629 SLC29A3Q9BZD2 475 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 STRADBQ9C0K7 418 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 DRC3Q9H069 523 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 GSTO2Q9H4Y5 243 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 NT5DC2Q9H857 520 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 ACTR8Q9H981 624 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 PDE7BQ9NP56 450 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 MRPS30Q9NP92 439 aaKnown RBP5.47□□□□□ -1.53
SCAF11-213ENST00000550629 INTS9Q9NV88 658 aaKnown RBP5.47□□□□□ -1.53
SCAF11-213ENST00000550629 FBXO34Q9NWN3 711 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 DLL3Q9NYJ7 618 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 FAM30AQ9NZY2 134 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 AKAP7Q9P0M2 348 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-213ENST00000550629 TUBD1Q9UJT1 453 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 PACSIN3Q9UKS6 424 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 RUVBL1Q9Y265 456 aaKnown RBP5.47□□□□□ -1.53
SCAF11-213ENST00000550629 BTRCQ9Y297 605 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 CABIN1Q9Y6J0 2220 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 RALGAPA1Q6GYQ0 2036 aa5.47□□□□□ -1.53
SCAF11-213ENST00000550629 IGHV5-51A0A0C4DH38 117 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 IGKV1-8A0A0C4DH67 115 aa5.46□□□□□ -1.54
SCAF11-213ENST00000550629 SPAARA0A1B0GVQ0 90 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms