RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 RAD51DO75771 328 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 CLIC3O95833 236 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 CCND3P30281 292 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 MLLT10P55197 1068 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF763Q0D2J5 394 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 LASP1Q14847 261 aaKnown RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 CDCA2Q69YH5 1023 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 LAS2Q8IYD9 372 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 SLC15A4Q8N697 577 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 OR9A1PQ8NGU1 263 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 BBS10Q8TAM1 723 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 CD99L2Q8TCZ2 262 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 MCHR1Q99705 422 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ATG5Q9H1Y0 275 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 CNOT11Q9UKZ1 510 aaKnown RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 KDELR3O43731 214 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 MRPL3P09001 348 aaKnown RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 HSD3B1P14060 373 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 LAPTM4AQ15012 233 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 PAFAH1B3Q15102 231 aaKnown RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 C11orf91Q3C1V1 193 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 TPRG1Q6ZUI0 275 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF550Q7Z398 422 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ZER1Q7Z7L7 766 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 CILP2Q8IUL8 1156 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 REM2Q8IYK8 340 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF283Q8N7M2 679 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 OR6C4Q8NGE1 309 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 OR51G2Q8NGK0 314 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ARNTL2Q8WYA1 636 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF516Q92618 1163 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 KCNA7Q96RP8 456 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF416Q9BWM5 594 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 TTTY10Q9BZA0 68 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 KATNBL1Q9H079 304 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 PTGES2Q9H7Z7 377 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF395Q9H8N7 513 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 GKN1Q9NS71 199 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 NRP1O14786 923 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 USP2O75604 605 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 IFNA5P01569 189 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 GBAP04062 536 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 AFF3P51826 1226 aaKnown RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 RAB8AP61006 207 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 KCNC4Q03721 635 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ATP6AP1Q15904 470 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF705AQ6ZN79 300 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 NEIL3Q8TAT5 605 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 HYLS1Q96M11 299 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 KLHL15Q96M94 604 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 STRA6Q9BX79 667 aa9.57□□□□□ -0.88
COL4A6-208ENST00000538570 TP63Q9H3D4 680 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-208ENST00000538570 M0R2N6 131 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 FAM189A1O60320 539 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 CFIP05156 583 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 CBLP22681 906 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 GGT5P36269 586 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 GRIK2Q13002 908 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 GINS1Q14691 196 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 MLIPQ5VWP3 458 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 Q6ZVU0 165 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 SLC9B2Q86UD5 537 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF611Q8N823 705 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 ARL6Q9H0F7 186 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 POPDC3Q9HBV1 291 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 XPNPEP1Q9NQW7 623 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 KCNS2Q9ULS6 477 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 PLAGL1Q9UM63 463 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 YIPF1Q9Y548 306 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 BCL9LQ86UU0 1499 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 PEX12O00623 359 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 EEF1E1O43324 174 aaKnown RBP9.56□□□□□ -0.88
COL4A6-208ENST00000538570 KLK3P07288 261 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-208ENST00000538570 RPL10P27635 214 aaKnown RBP9.56□□□□□ -0.88
COL4A6-208ENST00000538570 ADH7P40394 386 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 HNRNPFP52597 415 aaKnown RBP9.56□□□□□ -0.88
COL4A6-208ENST00000538570 STC1P52823 247 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 CREB5Q02930 508 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 CRHR2Q13324 411 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 PIGGQ5H8A4 983 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 NKAPLQ5M9Q1 402 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 TMEM69Q5SWH9 247 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 C7orf61Q8IZ16 206 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 C2CD4AQ8NCU7 369 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-208ENST00000538570 PEX13Q92968 403 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 ACSL5Q9ULC5 683 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 SCML2Q9UQR0 700 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 UNCXA6NJT0 531 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 A8MU76 341 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 F5H0A9 414 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-208ENST00000538570 AOC2O75106 756 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 SOX2P48431 317 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 POU6F2P78424 691 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-208ENST00000538570 SLC25A11Q02978 314 aaKnown RBP9.56□□□□□ -0.88
COL4A6-208ENST00000538570 MLLT1Q03111 559 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-208ENST00000538570 ZNF792Q3KQV3 632 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 DCUN1D3Q8IWE4 304 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 OTUB2Q96DC9 234 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 SUSD3Q96L08 255 aa9.56□□□□□ -0.88
COL4A6-208ENST00000538570 TREX2Q9BQ50 279 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms