RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 UBTD1Q9HAC8 227 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 SH2D2AQ9NP31 389 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 C20orf96Q9NUD7 363 aaPredicted RBP11.53□□□□□ -0.56
DDX41-215ENST00000512431 RYDENQ9NUL5 291 aaKnown RBP11.53□□□□□ -0.56
DDX41-215ENST00000512431 GALNT8Q9NY28 637 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 COL6A5A8TX70 2615 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 CTAGE15A4D2H0 777 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 LRIT2A6NDA9 550 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 SDR42E2A6NKP2 422 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 CYR61O00622 381 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 MSH2P43246 934 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 PLA2G16P53816 162 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 TERF1P54274 439 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 DIO3P55073 304 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 LIM2P55344 173 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 KIF5AQ12840 1032 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 TOMM20Q15388 145 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 VASNQ6EMK4 673 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 ADGRD1Q6QNK2 874 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 C20orf204Q6ZNR8 217 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 CTAGE6Q86UF2 777 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 PHC2Q8IXK0 858 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 NTNG2Q96CW9 530 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 MS4A6EQ96DS6 147 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 NDNQ99608 321 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 FAM167BQ9BTA0 163 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 SFXN3Q9BWM7 321 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.52□□□□□ -0.57
DDX41-215ENST00000512431 ZNF226Q9NYT6 803 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 C6orf203Q9P0P8 240 aaPredicted RBP11.52□□□□□ -0.57
DDX41-215ENST00000512431 DAPP1Q9UN19 280 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 SPACA6W5XKT8 324 aa11.52□□□□□ -0.57
DDX41-215ENST00000512431 MPDZO75970 2070 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 TCRBV7S3A2A0A539 114 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 ANKDD1BA6NHY2 528 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 ACSL3O95573 720 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 ENO2P09104 434 aaPredicted RBP11.51□□□□□ -0.57
DDX41-215ENST00000512431 GSTM2P28161 218 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 HNRNPH1P31943 449 aaKnown RBP11.51□□□□□ -0.57
DDX41-215ENST00000512431 GCKP35557 465 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 MTTPP55157 894 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 EEF1A1P68104 462 aaKnown RBP11.51□□□□□ -0.57
DDX41-215ENST00000512431 TGM3Q08188 693 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 EEF1A1P5Q5VTE0 462 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 DRICH1Q6PGQ1 229 aaPredicted RBP11.51□□□□□ -0.57
DDX41-215ENST00000512431 TMIGD1Q6UXZ0 262 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 OR2L5Q8NG80 312 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 OR10G3Q8NGC4 313 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 ZNF721Q8TF20 911 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 SENP5Q96HI0 755 aaPredicted RBP11.51□□□□□ -0.57
DDX41-215ENST00000512431 ART5Q96L15 291 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 ZFP3Q96NJ6 502 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 CSF3RQ99062 836 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 GSX2Q9BZM3 304 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 REXO4Q9GZR2 422 aaKnown RBP11.51□□□□□ -0.57
DDX41-215ENST00000512431 AICDAQ9GZX7 198 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 RBSNQ9H1K0 784 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 ACBD3Q9H3P7 528 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 PIGMQ9H3S5 423 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 SLC22A14Q9Y267 594 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 SLC6A5Q9Y345 797 aa11.51□□□□□ -0.57
DDX41-215ENST00000512431 REXO2Q9Y3B8 237 aaKnown RBP11.51□□□□□ -0.57
DDX41-215ENST00000512431 ZCWPW2A0A1B0GU75 182 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 CAPN14A8MX76 684 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 TP53I11O14683 189 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 LDB3O75112 727 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 SNX4O95219 450 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 ETHE1O95571 254 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 HPNP05981 417 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 C1GALT1C1LP0DN25 315 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 CYP4B1P13584 511 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 GNAZP19086 355 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 MASP1P48740 699 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 PTH2RP49190 550 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 PDAP1Q13442 181 aaKnown RBP11.5□□□□□ -0.57
DDX41-215ENST00000512431 HSP90AA5PQ58FG0 334 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 NHSL2Q5HYW2 709 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 SLC29A4Q7RTT9 530 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 PACS2Q86VP3 889 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 KRT78Q8N1N4 520 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 ZNF441Q8N8Z8 693 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 C9orf106Q8NAJ2 232 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 ZPLD1Q8TCW7 415 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 DIO2Q92813 273 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 ABTB1Q969K4 478 aaPredicted RBP11.5□□□□□ -0.57
DDX41-215ENST00000512431 PIK3IP1Q96FE7 263 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 RBM18Q96H35 190 aaKnown RBP11.5□□□□□ -0.57
DDX41-215ENST00000512431 WDYHV1Q96HA8 205 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 QRFPRQ96P65 431 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 DGAT2Q96PD7 388 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 TM9SF2Q99805 663 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 ROGDIQ9GZN7 287 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 PROK2Q9HC23 129 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 PRM3Q9NNZ6 103 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 IARS2Q9NSE4 1012 aaKnown RBP11.5□□□□□ -0.57
DDX41-215ENST00000512431 CNOT11Q9UKZ1 510 aaKnown RBP11.5□□□□□ -0.57
DDX41-215ENST00000512431 TESMINQ9Y4I5 508 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 NPFFR2Q9Y5X5 522 aa11.5□□□□□ -0.57
DDX41-215ENST00000512431 CHCHD2Q9Y6H1 151 aaPredicted RBP11.5□□□□□ -0.57
DDX41-215ENST00000512431 EML6Q6ZMW3 1958 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms