RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 STRADBQ9C0K7 418 aa3.81□□□□□ -1.8
SMNDC1-205ENST00000477763 WWP1Q9H0M0 922 aa3.81□□□□□ -1.8
SMNDC1-205ENST00000477763 DDX47Q9H0S4 455 aaKnown RBP3.81□□□□□ -1.8
SMNDC1-205ENST00000477763 SLC26A1Q9H2B4 701 aa3.81□□□□□ -1.8
SMNDC1-205ENST00000477763 SP140LQ9H930 580 aa3.81□□□□□ -1.8
SMNDC1-205ENST00000477763 KCNMB3Q9NPA1 279 aa3.81□□□□□ -1.8
SMNDC1-205ENST00000477763 GDF3Q9NR23 364 aa3.81□□□□□ -1.8
SMNDC1-205ENST00000477763 PIGVQ9NUD9 493 aa3.81□□□□□ -1.8
SMNDC1-205ENST00000477763 ANO10Q9NW15 660 aa3.81□□□□□ -1.8
SMNDC1-205ENST00000477763 MOB4Q9Y3A3 225 aa3.81□□□□□ -1.8
SMNDC1-205ENST00000477763 TEX264Q9Y6I9 313 aa3.81□□□□□ -1.8
SMNDC1-205ENST00000477763 MACROD2A1Z1Q3 448 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 ARHGEF33A8MVX0 844 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 NEDD8-MDP1E9PL57 170 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 TLR4O00206 839 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 PDHXO00330 501 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 SNAP91O60641 907 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 CSO75390 466 aaKnown RBP3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 BCAS2O75934 225 aaPredicted RBP3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 SORBS2O94875 1100 aaKnown RBP3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 POP4O95707 220 aaKnown RBP3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 PCP11498 1178 aaKnown RBP3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 FCARP24071 287 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 MARCKSP29966 332 aaPredicted RBP3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 HNRNPFP52597 415 aaKnown RBP3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 RIDAP52758 137 aaKnown RBP3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 SSTP61278 116 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 HERV-K104P63124 156 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 SRPXP78539 464 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 RIGQ13278 110 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 WSCD2Q2TBF2 565 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 HIST2H2AA3Q6FI13 130 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 RTL6Q6ICC9 239 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 MCM10Q7L590 875 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 MIER3Q7Z3K6 550 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 ZNF440Q8IYI8 595 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 LEMD2Q8NC56 503 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 ICA1LQ8NDH6 482 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 EXOC6Q8TAG9 804 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 URGCPQ8TCY9 931 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 C11orf52Q96A22 123 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 RPGRIP1Q96KN7 1286 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 GPR137Q96N19 417 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 TNFRSF13CQ96RJ3 184 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 RAB40CQ96S21 281 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 PKP2Q99959 881 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 RBM4BQ9BQ04 359 aaKnown RBP3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 CABLES2Q9BTV7 478 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 FUNDC2Q9BWH2 189 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 MOB1AQ9H8S9 216 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 TECRQ9NZ01 308 aaKnown RBP3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 THYN1Q9P016 225 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 THAP10Q9P2Z0 257 aaPredicted RBP3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 ERVK-18Q9QC07 812 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 AUP1Q9Y679 476 aa3.8□□□□□ -1.8
SMNDC1-205ENST00000477763 IGLV4-3A0A075B6K6 122 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 IGLON5A6NGN9 336 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 FBP2O00757 339 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 NME2P1O60361 137 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 TBX6O95947 436 aaPredicted RBP3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 APRTP07741 180 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 HIST1H2AGP0C0S8 130 aaPredicted RBP3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 MBL2P11226 248 aaPredicted RBP3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 SELEP16581 610 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 OXTRP30559 389 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 SLC1A6P48664 564 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 SLC12A3P55017 1021 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 CASP9P55211 416 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 PEX3P56589 373 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 RPS27AP62979 156 aaKnown RBP3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 MS4A2Q01362 244 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 WASHC5Q12768 1159 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 FASTKQ14296 549 aaKnown RBP3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 NKAIN2Q5VXU1 208 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 NEPROQ6NW34 567 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 DLEU7Q6UYE1 221 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 KCNMB4Q86W47 210 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 CATSPER3Q86XQ3 398 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 BATF2Q8N1L9 274 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 CHCHD4Q8N4Q1 142 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 BANPQ8N9N5 519 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 HIST1H2ACQ93077 130 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 MRPL24Q96A35 216 aaKnown RBP3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 ESAMQ96AP7 390 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 DTD2Q96FN9 168 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 ATF6BQ99941 703 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 VGLL1Q99990 258 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 CHCHD5Q9BSY4 110 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 SPXQ9BT56 116 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 ABCG8Q9H221 673 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 HOMER3Q9NSC5 361 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 DEPPQ9NTK1 212 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 FETUBQ9UGM5 382 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 NARFQ9UHQ1 456 aa3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 NIP7Q9Y221 180 aaKnown RBP eCLIP3.79□□□□□ -1.8
SMNDC1-205ENST00000477763 GPRASP1Q5JY77 1395 aa3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 BCLAF3A2AJT9 711 aaKnown RBP3.78□□□□□ -1.8
SMNDC1-205ENST00000477763 CCDC69A6NI79 296 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms