RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 TBL3Q12788 808 aaKnown RBP16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 DUSP8Q13202 625 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 ZNF460Q14592 562 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 PCBP2Q15366 365 aaKnown RBP eCLIP16.58■□□□□ 0.248e-7■■■■□ 21.8
CHCHD3-203ENST00000448878 ZNF791Q3KP31 576 aaPredicted RBP16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 ADNP2Q6IQ32 1131 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 DOK4Q8TEW6 326 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 NUDT8Q8WV74 236 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 PPWD1Q96BP3 646 aaKnown RBP16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 SPACA9Q96E40 222 aaPredicted RBP16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 SENP5Q96HI0 755 aaPredicted RBP16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 MAPKAP1Q9BPZ7 522 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 DOHHQ9BU89 302 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 CAPS2Q9BXY5 557 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 ACKR4Q9NPB9 350 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 ZNF629Q9UEG4 869 aaPredicted RBP16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 CAMK2AQ9UQM7 478 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 PCDHGB3Q9Y5G1 929 aa16.58■□□□□ 0.24
CHCHD3-203ENST00000448878 ZNF37AP17032 561 aaPredicted RBP16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 CPN2P22792 545 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 CEACAM8P31997 349 aaPredicted RBP16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 KCNC1P48547 511 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 DCAF7P61962 342 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 CDKL1Q00532 357 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 TOMM20Q15388 145 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 ADPRMQ3LIE5 342 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 ACSF3Q4G176 576 aaPredicted RBP16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 RNASEH2BQ5TBB1 312 aaKnown RBP16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 LACC1Q8IV20 430 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 LRRC25Q8N386 305 aaPredicted RBP16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 VWA5B2Q8N398 1253 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 SNX31Q8N9S9 440 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 PAQR8Q8TEZ7 354 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 GRK7Q8WTQ7 553 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 RHBDF1Q96CC6 855 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 HSPBAP1Q96EW2 488 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 RBM18Q96H35 190 aaKnown RBP16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 KCNC2Q96PR1 638 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 GAL3ST4Q96RP7 486 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 TRIB1Q96RU8 372 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 NAT9Q9BTE0 207 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 ROGDIQ9GZN7 287 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 NT5DC2Q9H857 520 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 PRDM7Q9NQW5 492 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 CNIH4Q9P003 139 aa16.57■□□□□ 0.24
CHCHD3-203ENST00000448878 CLCA1A8K7I4 914 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 RTCAO00442 366 aaKnown RBP16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 SERPINB3P29508 390 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 ZNF136P52737 540 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 TSNQ15631 228 aaKnown RBP16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 FBXL19-AS1Q494R0 122 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 MSS51Q4VC12 460 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 FBXO48Q5FWF7 155 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 ADGRD1Q6QNK2 874 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 VN1R5Q7Z5H4 357 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 GALNT7Q86SF2 657 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 IGDCC3Q8IVU1 814 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 C9orf40Q8IXQ3 194 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 RASGEF1CQ8N431 466 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 LRRN4CLQ8ND94 238 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 OR10G3Q8NGC4 313 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 NUBPLQ8TB37 319 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 ESAMQ96AP7 390 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 ANKRD9Q96BM1 317 aaPredicted RBP16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 KRT12Q99456 494 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 PLEKHF2Q9H8W4 249 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 LYRM4Q9HD34 91 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 QPCTLQ9NXS2 382 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 WWOXQ9NZC7 414 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 ASIC3Q9UHC3 531 aa16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 ZNF490Q9ULM2 529 aaPredicted RBP16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 HRNRQ86YZ3 2850 aaPredicted RBP16.56■□□□□ 0.24
CHCHD3-203ENST00000448878 NCKAP5O14513 1909 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 IQANK1A0A1B0GTG1 560 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 LRRC3CA6NJW4 275 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 ACSL3O95573 720 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 TBX6O95947 436 aaPredicted RBP16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 TIMP3P35625 211 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 RPL21P46778 160 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 SLC6A12P48065 614 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 SF3B4Q15427 424 aaKnown RBP eCLIP16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 HIST2H2ACQ16777 129 aaPredicted RBP16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 AP5B1Q2VPB7 878 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 HIST2H2AA3Q6FI13 130 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 TRMT10BQ6PF06 316 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 SLC29A4Q7RTT9 530 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 ADAMTSL2Q86TH1 951 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 PM20D2Q8IYS1 436 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 SLC15A4Q8N697 577 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 ACOT4Q8N9L9 421 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 SRFBP1Q8NEF9 429 aaKnown RBP16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 DIO2Q92813 273 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 ART5Q96L15 291 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 TIMP4Q99727 224 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 PITHD1Q9GZP4 211 aaPredicted RBP16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 PROK2Q9HC23 129 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 DNAJC11Q9NVH1 559 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 GPRC5BQ9NZH0 403 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 CHMP2BQ9UQN3 213 aa16.55■□□□□ 0.24
CHCHD3-203ENST00000448878 FLNAP21333 2647 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms