RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SETDB1Q15047 1291 aa19.48■□□□□ 0.71
VSX1-206ENST00000444511 PFKFB4Q16877 469 aa19.48■□□□□ 0.71
VSX1-206ENST00000444511 NDUFAF5Q5TEU4 345 aa19.48■□□□□ 0.71
VSX1-206ENST00000444511 GPR180Q86V85 440 aa19.48■□□□□ 0.71
VSX1-206ENST00000444511 C17orf53Q8N3J3 647 aaPredicted RBP19.48■□□□□ 0.71
VSX1-206ENST00000444511 MARVELD2Q8N4S9 558 aa19.48■□□□□ 0.71
VSX1-206ENST00000444511 RBM18Q96H35 190 aaKnown RBP19.48■□□□□ 0.71
VSX1-206ENST00000444511 SENP5Q96HI0 755 aaPredicted RBP19.48■□□□□ 0.71
VSX1-206ENST00000444511 MTERF1Q99551 399 aaKnown RBP19.48■□□□□ 0.71
VSX1-206ENST00000444511 ZDHHC11Q9H8X9 412 aa19.48■□□□□ 0.71
VSX1-206ENST00000444511 DMRT3Q9NQL9 472 aa19.48■□□□□ 0.71
VSX1-206ENST00000444511 SNX15Q9NRS6 342 aa19.48■□□□□ 0.71
VSX1-206ENST00000444511 SACM1LQ9NTJ5 587 aa19.48■□□□□ 0.71
VSX1-206ENST00000444511 PCDHGA11Q9Y5H2 935 aa19.48■□□□□ 0.71
VSX1-206ENST00000444511 FBN2P35556 2912 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 CCDC189A1A4V9 331 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 PLPP1O14494 284 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 P04436 131 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 NR0B1P51843 470 aaKnown RBP19.47■□□□□ 0.71
VSX1-206ENST00000444511 IGLV3-21P80748 117 aaPredicted RBP19.47■□□□□ 0.71
VSX1-206ENST00000444511 TNFRSF17Q02223 184 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 GUCY2DQ02846 1103 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 ASPHQ12797 758 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 BIKQ13323 160 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 ACAP2Q15057 778 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 UAP1Q16222 522 aaPredicted RBP19.47■□□□□ 0.71
VSX1-206ENST00000444511 LIPJQ5W064 366 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 KLC3Q6P597 504 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 FAM47EQ6ZV65 393 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 ZCCHC7Q8N3Z6 543 aaKnown RBP19.47■□□□□ 0.71
VSX1-206ENST00000444511 ASB5Q8WWX0 329 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 TANKQ92844 425 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 PPWD1Q96BP3 646 aaKnown RBP19.47■□□□□ 0.71
VSX1-206ENST00000444511 REPS1Q96D71 796 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 ART5Q96L15 291 aa19.47■□□□□ 0.71
VSX1-206ENST00000444511 GTF3C1Q12789 2109 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 ESYT3A0FGR9 886 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 NPIPA2E9PIF3 369 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 NPIPA3F8WFD2 350 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 ZNF354AO60765 605 aaPredicted RBP19.46■□□□□ 0.71
VSX1-206ENST00000444511 PTX3P26022 381 aaPredicted RBP19.46■□□□□ 0.71
VSX1-206ENST00000444511 BUD31P41223 144 aaPredicted RBP19.46■□□□□ 0.71
VSX1-206ENST00000444511 ALDH18A1P54886 795 aaKnown RBP19.46■□□□□ 0.71
VSX1-206ENST00000444511 RPS13P62277 151 aaKnown RBP19.46■□□□□ 0.71
VSX1-206ENST00000444511 SLC7A5Q01650 507 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 FOLH1Q04609 750 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 MPEG1Q2M385 716 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 MEX3BQ6ZN04 569 aaKnown RBP19.46■□□□□ 0.71
VSX1-206ENST00000444511 NUBPLQ8TB37 319 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 SLC22A8Q8TCC7 542 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 CHTF18Q8WVB6 975 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 RND1Q92730 232 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 ENKD1Q9H0I2 346 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 IL1RL2Q9HB29 575 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.46■□□□□ 0.71
VSX1-206ENST00000444511 TSC22D4Q9Y3Q8 395 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 ATG4BQ9Y4P1 393 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.46■□□□□ 0.71
VSX1-206ENST00000444511 PKDREJQ9NTG1 2253 aa19.46■□□□□ 0.71
VSX1-206ENST00000444511 A0A096LPK6 155 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 GLSO94925 669 aaPredicted RBP19.45■□□□□ 0.7
VSX1-206ENST00000444511 CCL3P10147 92 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 ALOX15P16050 662 aaPredicted RBP19.45■□□□□ 0.7
VSX1-206ENST00000444511 CHRNB4P30926 498 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 PHBP35232 272 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 DNASE1L1P49184 302 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 ARFIP1P53367 373 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 HNRNPH2P55795 449 aaKnown RBP19.45■□□□□ 0.7
VSX1-206ENST00000444511 CPSF6Q16630 551 aaKnown RBP eCLIP19.45■□□□□ 0.7
VSX1-206ENST00000444511 PIGGQ5H8A4 983 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 EMC4Q5J8M3 183 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 C18orf63Q68DL7 685 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 C8orf74Q6P047 294 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 ZNF572Q7Z3I7 529 aaPredicted RBP19.45■□□□□ 0.7
VSX1-206ENST00000444511 C9orf40Q8IXQ3 194 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 FAM109AQ8N4B1 249 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 TMEM251Q8N6I4 163 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 OR5M3Q8NGP4 307 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 FBXL20Q96IG2 436 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 SMC6Q96SB8 1091 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 LYARQ9NX58 379 aaKnown RBP19.45■□□□□ 0.7
VSX1-206ENST00000444511 CPSF2Q9P2I0 782 aaKnown RBP19.45■□□□□ 0.7
VSX1-206ENST00000444511 RNF6Q9Y252 685 aa19.45■□□□□ 0.7
VSX1-206ENST00000444511 TNPO3Q9Y5L0 923 aaKnown RBP19.45■□□□□ 0.7
VSX1-206ENST00000444511 HMX2A2RU54 273 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 LRRC14BA6NHZ5 514 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 H0YIV9 168 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 OR10H2O60403 315 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 UGDHO60701 494 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 PRKRAO75569 313 aaKnown RBP19.44■□□□□ 0.7
VSX1-206ENST00000444511 KLHL2O95198 593 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 IGKV3-11P04433 115 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 TYK2P29597 1187 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 MAGEA5P43359 124 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 PIK3CGP48736 1102 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 SERPINB8P50452 374 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 CKAP4Q07065 602 aaKnown RBP19.44■□□□□ 0.7
VSX1-206ENST00000444511 GTF2H2Q13888 395 aa19.44■□□□□ 0.7
VSX1-206ENST00000444511 PCBP2Q15366 365 aaKnown RBP eCLIP19.44■□□□□ 0.7
VSX1-206ENST00000444511 GXYLT1Q4G148 440 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms