RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 NUS1Q96E22 293 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 MSANTD3Q96H12 275 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 RILPQ96NA2 401 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 MCCC1Q96RQ3 725 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 COPS8Q99627 209 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 P2RY13Q9BPV8 354 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 SIKE1Q9BRV8 207 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZSCAN5AQ9BUG6 496 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 WRAP53Q9BUR4 548 aaKnown RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 C1QTNF1Q9BXJ1 281 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 DERL2Q9GZP9 239 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 S1PR5Q9H228 398 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ALG9Q9H6U8 611 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 C8orf33Q9H7E9 229 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ACTR5Q9H9F9 607 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZNF304Q9HCX3 659 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ZDHHC4Q9NPG8 344 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 THAP1Q9NVV9 213 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ARL15Q9NXU5 204 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 NUDT4Q9NZJ9 180 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 THAP10Q9P2Z0 257 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 NFKBIL1Q9UBC1 381 aaPredicted RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 EPS15L1Q9UBC2 864 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 TMCO1Q9UM00 188 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 ITM2BQ9Y287 266 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 DNAJC16Q9Y2G8 782 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 PPIL1Q9Y3C6 166 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 COPG1Q9Y678 874 aaKnown RBP3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 STON1Q9Y6Q2 735 aa3.66□□□□□ -1.82
HMGB3P20-201ENST00000417997 TRBV5-4A0A0C4DH59 114 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 A0A1B0GVT2 93 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 AGAP5A6NIR3 686 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 CCT8L1PA6NM43 557 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 A8MT66 165 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 IQCF5A8MTL0 148 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 C2CD4DB7Z1M9 353 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 MCIDASD6RGH6 385 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ANHXE9PGG2 379 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 SPECC1L-ADORA2AF8WAN1 911 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 SLCO1B7G3V0H7 640 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 G3V2L1 256 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 H0YHG0 523 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 UBXN8O00124 270 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 PLK4O00444 970 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 GAPDHSO14556 408 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 RAD51BO15315 384 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 INPP4BO15327 924 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 MBTPS2O43462 519 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZBTB14O43829 449 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 OR1I1O60431 355 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 CCDC22O60826 627 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 DIAPH2O60879 1101 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 SNNO75324 88 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 SUPT7LO94864 414 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 SLC25A14O95258 325 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 TGDSO95455 350 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 KLF8O95600 359 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 DNTTP04053 509 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 PCCBP05166 539 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 LCKP06239 509 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 TPBGLP0DKB5 382 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ADRB3P13945 408 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 EZRP15311 586 aaKnown RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 FOSL2P15408 326 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 UGT1A6P19224 532 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 UGT1A1P22309 533 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 UGT1A4P22310 534 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 DGKAP23743 735 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 PBLDP30039 288 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 UGT1A3P35503 534 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 UGT1A5P35504 534 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 SERPINB5P36952 375 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 TNFRSF4P43489 277 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 GPR1P46091 355 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 RFX2P48378 723 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 CSRP3P50461 194 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 AQP5P55064 265 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ADARP55265 1226 aaKnown RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 HNRNPH2P55795 449 aaKnown RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 NAA20P61599 178 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 LTBQ06643 244 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 GRSF1Q12849 480 aaKnown RBP eCLIP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 PRKAA1Q13131 559 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 NFATC4Q14934 902 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 PON2Q15165 354 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 TSNQ15631 228 aaKnown RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 CST6Q15828 149 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 RBBP7Q16576 425 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 CDKN3Q16667 212 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ATP13A5Q4VNC0 1218 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 Q5PR19 223 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 SH2D4BQ5SQS7 431 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 LDLRAP1Q5SW96 308 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 C9orf64Q5T6V5 341 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 GPRC6AQ5T6X5 926 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 SEL1L3Q68CR1 1132 aa3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZNF324BQ6AW86 544 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 CAPRIN2Q6IMN6 1127 aaKnown RBP3.65□□□□□ -1.83
HMGB3P20-201ENST00000417997 CGB2Q6NT52 195 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms