RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 CAPN13Q6MZZ7 669 aaPredicted RBP4.59□□□□□ -1.67
GABPB1-204ENST00000396464 GAGE2AQ6NT46 116 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 TRMT10CQ7L0Y3 403 aaKnown RBP4.59□□□□□ -1.67
GABPB1-204ENST00000396464 GPR141Q7Z602 305 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 SLC22A16Q86VW1 577 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 SFTPA2Q8IWL1 248 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 TMEM123Q8N131 208 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 GTPBP8Q8N3Z3 284 aaPredicted RBP4.59□□□□□ -1.67
GABPB1-204ENST00000396464 FAM86B1Q8N7N1 296 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 FNDC5Q8NAU1 212 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 SPRYD4Q8WW59 207 aaPredicted RBP4.59□□□□□ -1.67
GABPB1-204ENST00000396464 CDKL2Q92772 493 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 SLCO2A1Q92959 643 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 BOD1Q96IK1 185 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 HPDLQ96IR7 371 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 FAM20AQ96MK3 541 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 DUX5Q96PT3 197 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 CCT8L2Q96SF2 557 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 LRRC2Q9BYS8 371 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 Q9H8V8 135 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 GALNT9Q9HCQ5 603 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 GSN-AS1Q9NRJ2 163 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 MAN2C1Q9NTJ4 1040 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 ZDHHC18Q9NUE0 388 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 DDX28Q9NUL7 540 aaKnown RBP4.59□□□□□ -1.67
GABPB1-204ENST00000396464 SMOXQ9NWM0 555 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 GAR1Q9NY12 217 aaKnown RBP4.59□□□□□ -1.67
GABPB1-204ENST00000396464 NPAP1Q9NZP6 1156 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 PIPOXQ9P0Z9 390 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 RCC2Q9P258 522 aaKnown RBP4.59□□□□□ -1.67
GABPB1-204ENST00000396464 GAGE2DQ9UEU5 116 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 SLC22A14Q9Y267 594 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 TMED3Q9Y3Q3 217 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 NOX1Q9Y5S8 564 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 COX11Q9Y6N1 276 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 ATXN2Q99700 1313 aaKnown RBP4.59□□□□□ -1.67
GABPB1-204ENST00000396464 INSRP06213 1382 aa4.59□□□□□ -1.67
GABPB1-204ENST00000396464 CECR2Q9BXF3 1484 aa4.59□□□□□ -1.68
GABPB1-204ENST00000396464 SMARCA2P51531 1590 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 LOC105371242A0A075B767 164 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 KCNU1A8MYU2 1149 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 C9JVG2 144 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 TEX46H3BTG2 121 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 NR5A2O00482 541 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 RRHO14718 337 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 LSM1O15116 133 aaKnown RBP4.58□□□□□ -1.68
GABPB1-204ENST00000396464 MDM4O15151 490 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 EIF3HO15372 352 aaKnown RBP eCLIP4.58□□□□□ -1.68
GABPB1-204ENST00000396464 UGDHO60701 494 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 CABYRO75952 493 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 NDUFB4O95168 129 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 CLDN7O95471 211 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 CBSLP0DN79 551 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 FCGR1AP12314 374 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 ST6GAL1P15907 406 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 NCK1P16333 377 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 ZNF10P21506 573 aaPredicted RBP4.58□□□□□ -1.68
GABPB1-204ENST00000396464 DGKAP23743 735 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 FCARP24071 287 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 RRM2P31350 389 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 RPL9P32969 192 aaKnown RBP4.58□□□□□ -1.68
GABPB1-204ENST00000396464 CD80P33681 288 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 CBSP35520 551 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 SPAM1P38567 509 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 CCNHP51946 323 aaPredicted RBP4.58□□□□□ -1.68
GABPB1-204ENST00000396464 GEMP55040 296 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 ELLP55199 621 aaPredicted RBP4.58□□□□□ -1.68
GABPB1-204ENST00000396464 RGS8P57771 180 aaPredicted RBP4.58□□□□□ -1.68
GABPB1-204ENST00000396464 IRF8Q02556 426 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 ILKQ13418 452 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 CDH18Q13634 790 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 GNA13Q14344 377 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 NONOQ15233 471 aaKnown RBP eCLIP4.58□□□□□ -1.686e-6■□□□□ 10
GABPB1-204ENST00000396464 EXT1Q16394 746 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 BEAN1Q3B7T3 259 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 SLC25A53Q5H9E4 307 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 ABHD17BQ5VST6 288 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 WSCD1Q658N2 575 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 SPECC1LQ69YQ0 1117 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 C8orf74Q6P047 294 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 CEP85Q6P2H3 762 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 ZNF852Q6ZMS4 543 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 COLCA1Q6ZS62 124 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 CYB5R4Q7L1T6 521 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 BCDIN3DQ7Z5W3 292 aaKnown RBP4.58□□□□□ -1.68
GABPB1-204ENST00000396464 FAM58AQ8N1B3 248 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 MUC20Q8N307 709 aaPredicted RBP4.58□□□□□ -1.68
GABPB1-204ENST00000396464 GCSAMQ8N6F7 178 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 MAB21L3Q8N8X9 362 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 THAP8Q8NA92 274 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 FAM83FQ8NEG4 500 aaPredicted RBP4.58□□□□□ -1.68
GABPB1-204ENST00000396464 OR52I2Q8NH67 350 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 LRRC20Q8TCA0 184 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 NTN5Q8WTR8 489 aaPredicted RBP4.58□□□□□ -1.68
GABPB1-204ENST00000396464 ST8SIA1Q92185 356 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 LGALS12Q96DT0 336 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 P2RY11Q96G91 374 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 INPP4AQ96PE3 977 aaPredicted RBP4.58□□□□□ -1.68
GABPB1-204ENST00000396464 ALS2CR12Q96Q35 445 aa4.58□□□□□ -1.68
GABPB1-204ENST00000396464 CIPCQ9C0C6 399 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms