RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 ZNF721Q8TF20 911 aa16.46■□□□□ 0.23
HDDC3-201ENST00000330334 SENP5Q96HI0 755 aaPredicted RBP16.46■□□□□ 0.23
HDDC3-201ENST00000330334 VKORC1Q9BQB6 163 aa16.46■□□□□ 0.23
HDDC3-201ENST00000330334 VPS11Q9H270 941 aa16.46■□□□□ 0.23
HDDC3-201ENST00000330334 CDC42EP4Q9H3Q1 356 aaKnown RBP16.46■□□□□ 0.23
HDDC3-201ENST00000330334 LYARQ9NX58 379 aaKnown RBP16.46■□□□□ 0.23
HDDC3-201ENST00000330334 COPS7AQ9UBW8 275 aa16.46■□□□□ 0.23
HDDC3-201ENST00000330334 ATG4BQ9Y4P1 393 aa16.46■□□□□ 0.23
HDDC3-201ENST00000330334 IKBKGQ9Y6K9 419 aa16.46■□□□□ 0.23
HDDC3-201ENST00000330334 APCP25054 2843 aa16.46■□□□□ 0.23
HDDC3-201ENST00000330334 ABCA12Q86UK0 2595 aa16.46■□□□□ 0.23
HDDC3-201ENST00000330334 GTF3C1Q12789 2109 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 LRRC14BA6NHZ5 514 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 WWP2O00308 870 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 DYRK3O43781 588 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 SH3BGRLO75368 114 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 KRT38O76015 456 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 OR6B1O95007 311 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 SIX3O95343 332 aaPredicted RBP16.45■□□□□ 0.22
HDDC3-201ENST00000330334 ACSL3O95573 720 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 HTR1EP28566 365 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 ECHS1P30084 290 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 BSGP35613 385 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 BUD31P41223 144 aaPredicted RBP16.45■□□□□ 0.22
HDDC3-201ENST00000330334 SOX3P41225 446 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 CPSF6Q16630 551 aaKnown RBP eCLIP16.45■□□□□ 0.22
HDDC3-201ENST00000330334 TSNAXIP1Q2TAA8 658 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 CMPK2Q5EBM0 449 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 PIGGQ5H8A4 983 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 UBAP2Q5T6F2 1119 aaKnown RBP16.45■□□□□ 0.22
HDDC3-201ENST00000330334 OPN5Q6U736 354 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 IL20RBQ6UXL0 311 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 RTL4Q6ZR62 310 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 LURAP1LQ8IV03 231 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 ST13P4Q8IZP2 240 aaPredicted RBP16.45■□□□□ 0.22
HDDC3-201ENST00000330334 RNF175Q8N4F7 328 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 ZNF321PQ8N8H1 164 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 NOA1Q8NC60 698 aaKnown RBP16.45■□□□□ 0.22
HDDC3-201ENST00000330334 AGAP11Q8TF27 550 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 ART5Q96L15 291 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 DGAT2Q96PD7 388 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 PHF12Q96QT6 1004 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 PAFAH2Q99487 392 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 PELOQ9BRX2 385 aaKnown RBP16.45■□□□□ 0.22
HDDC3-201ENST00000330334 NTMT1Q9BV86 223 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 SORBS1Q9BX66 1292 aaKnown RBP16.45■□□□□ 0.22
HDDC3-201ENST00000330334 LIN28AQ9H9Z2 209 aaKnown RBP16.45■□□□□ 0.22
HDDC3-201ENST00000330334 DEPPQ9NTK1 212 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 CPSF2Q9P2I0 782 aaKnown RBP16.45■□□□□ 0.22
HDDC3-201ENST00000330334 RNF11Q9Y3C5 154 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 ASB4Q9Y574 426 aa16.45■□□□□ 0.22
HDDC3-201ENST00000330334 ADGRG4Q8IZF6 3080 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 A0A0A6YYD5 115 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 MYOCOSA0A1B0GUC4 107 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 OR7A17O14581 309 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 ADAM10O14672 748 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 HS6ST1O60243 411 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 SEMA3DO95025 777 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 GPR75O95800 540 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 CTAGE8P0CG41 777 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 CNR1P21554 472 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 GALNSP34059 522 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 PTGER1P34995 402 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 PTGS2P35354 604 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 HNRNPH2P55795 449 aaKnown RBP16.44■□□□□ 0.22
HDDC3-201ENST00000330334 HSF1Q00613 529 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 PLIN5Q00G26 463 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 ID2Q02363 134 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 FOLH1Q04609 750 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 ARHGAP11AQ6P4F7 1023 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 PAOXQ6QHF9 649 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 CTAGE4Q8IX94 777 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 OR4N5Q8IXE1 308 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 SLC15A4Q8N697 577 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 PTGR2Q8N8N7 351 aaPredicted RBP16.44■□□□□ 0.22
HDDC3-201ENST00000330334 OR2M7Q8NG81 312 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 FAM57AQ8TBR7 257 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 IFT81Q8WYA0 676 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 FBXL20Q96IG2 436 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 SCYL1Q96KG9 808 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 DMRTA2Q96SC8 542 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 SERPINI1Q99574 410 aa16.44■□□□□ 0.22
HDDC3-201ENST00000330334 NOL11Q9H8H0 719 aaKnown RBP16.44■□□□□ 0.22
HDDC3-201ENST00000330334 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.44■□□□□ 0.22
HDDC3-201ENST00000330334 NCOA6Q14686 2063 aaPredicted RBP16.44■□□□□ 0.22
HDDC3-201ENST00000330334 A0A1B0GTH9 108 aa16.43■□□□□ 0.22
HDDC3-201ENST00000330334 ARHGAP10A1A4S6 786 aa16.43■□□□□ 0.22
HDDC3-201ENST00000330334 GLSO94925 669 aaPredicted RBP16.43■□□□□ 0.22
HDDC3-201ENST00000330334 FAM58BPP0C7Q3 252 aa16.43■□□□□ 0.22
HDDC3-201ENST00000330334 ALOX15P16050 662 aaPredicted RBP16.43■□□□□ 0.22
HDDC3-201ENST00000330334 GRNP28799 593 aaKnown RBP16.43■□□□□ 0.22
HDDC3-201ENST00000330334 PTGER4P35408 488 aa16.43■□□□□ 0.22
HDDC3-201ENST00000330334 GPR85P60893 370 aa16.43■□□□□ 0.22
HDDC3-201ENST00000330334 TBL3Q12788 808 aaKnown RBP16.43■□□□□ 0.22
HDDC3-201ENST00000330334 SPRED3Q2MJR0 410 aa16.43■□□□□ 0.22
HDDC3-201ENST00000330334 NDUFAF5Q5TEU4 345 aa16.43■□□□□ 0.22
HDDC3-201ENST00000330334 C18orf63Q68DL7 685 aa16.43■□□□□ 0.22
HDDC3-201ENST00000330334 DCAKDQ8WVC6 231 aa16.43■□□□□ 0.22
HDDC3-201ENST00000330334 MRPL57Q9BQC6 102 aaKnown RBP16.43■□□□□ 0.22
HDDC3-201ENST00000330334 ZDHHC11Q9H8X9 412 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms