RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 RPL3LQ92901 407 aaKnown RBP7.69□□□□□ -1.18
GPC3-204ENST00000631057 NXPE3Q969Y0 559 aa7.69□□□□□ -1.18
GPC3-204ENST00000631057 ITPKCQ96DU7 683 aa7.69□□□□□ -1.18
GPC3-204ENST00000631057 NEURL3Q96EH8 262 aa7.69□□□□□ -1.18
GPC3-204ENST00000631057 PDXPQ96GD0 296 aa7.69□□□□□ -1.18
GPC3-204ENST00000631057 FAM129BQ96TA1 746 aa7.69□□□□□ -1.18
GPC3-204ENST00000631057 BTBD2Q9BX70 525 aa7.69□□□□□ -1.18
GPC3-204ENST00000631057 SLC6A16Q9GZN6 736 aa7.69□□□□□ -1.18
GPC3-204ENST00000631057 PITHD1Q9GZP4 211 aaPredicted RBP7.69□□□□□ -1.18
GPC3-204ENST00000631057 SLIRPQ9GZT3 109 aaKnown RBP7.69□□□□□ -1.18
GPC3-204ENST00000631057 NEUROD4Q9HD90 331 aa7.69□□□□□ -1.18
GPC3-204ENST00000631057 A4GALTQ9NPC4 353 aa7.69□□□□□ -1.18
GPC3-204ENST00000631057 RLIMQ9NVW2 624 aa7.69□□□□□ -1.18
GPC3-204ENST00000631057 CNOT2Q9NZN8 540 aaKnown RBP7.69□□□□□ -1.18
GPC3-204ENST00000631057 SELENONQ9NZV5 590 aa7.69□□□□□ -1.18
GPC3-204ENST00000631057 DPP7Q9UHL4 492 aa7.69□□□□□ -1.18
GPC3-204ENST00000631057 PRAMEF25A6NGN4 478 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 PRRT4C9JH25 899 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 C1QTNF3-AMACRE9PGA6 284 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 M0R082 166 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 TAF4O00268 1085 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 CACNB4O00305 520 aaPredicted RBP7.68□□□□□ -1.18
GPC3-204ENST00000631057 PCDH17O14917 1159 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 CAPN5O15484 640 aaPredicted RBP7.68□□□□□ -1.18
GPC3-204ENST00000631057 PDPK1O15530 556 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 CNOT3O75175 753 aaKnown RBP7.68□□□□□ -1.18
GPC3-204ENST00000631057 FGBP02675 491 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 RPLP0P05388 317 aaKnown RBP7.68□□□□□ -1.18
GPC3-204ENST00000631057 ERGP11308 486 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 GADD45AP24522 165 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 CD40LGP29965 261 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 C21orf33P30042 268 aaPredicted RBP7.68□□□□□ -1.18
GPC3-204ENST00000631057 CTHP32929 405 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 CCR8P51685 355 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 PPP5CP53041 499 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 CNTN1Q12860 1018 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 IRF3Q14653 427 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 SYT16Q17RD7 645 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 PRSS53Q2L4Q9 553 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 ZNF404Q494X3 552 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 TOR1AIP1Q5JTV8 583 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 PERM1Q5SV97 790 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 DEPDC1Q5TB30 811 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 KHDRBS2Q5VWX1 349 aaKnown RBP7.68□□□□□ -1.18
GPC3-204ENST00000631057 SAXO2Q658L1 398 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 CEACAM20Q6UY09 585 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 FAM83HQ6ZRV2 1179 aaPredicted RBP7.68□□□□□ -1.18
GPC3-204ENST00000631057 ERN2Q76MJ5 926 aaKnown RBP7.68□□□□□ -1.18
GPC3-204ENST00000631057 BTLAQ7Z6A9 289 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 AMER2Q8N7J2 671 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 LMNTD1Q8N9Z9 388 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 OR9Q2Q8NGE9 314 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 OR5AR1Q8NGP9 310 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 PSMA8Q8TAA3 256 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 ZNF675Q8TD23 568 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 TFGQ92734 400 aaPredicted RBP7.68□□□□□ -1.18
GPC3-204ENST00000631057 RAB7BQ96AH8 199 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 ZNF764Q96H86 408 aaPredicted RBP7.68□□□□□ -1.18
GPC3-204ENST00000631057 COX14Q96I36 57 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 DACH2Q96NX9 599 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 LRRC3BQ96PB8 259 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 IL17FQ96PD4 163 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 NIPSNAP1Q9BPW8 284 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 MS4A8Q9BY19 250 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 ALOXE3Q9BYJ1 711 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 DSN1Q9H410 356 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 CXorf36Q9H7Y0 433 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 NT5DC2Q9H857 520 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 WASH6PQ9NQA3 447 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 CLN6Q9NWW5 311 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 CCDC59Q9P031 241 aaKnown RBP7.68□□□□□ -1.18
GPC3-204ENST00000631057 DEC1Q9P2X7 70 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 KCND3Q9UK17 655 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 TMCC3Q9ULS5 477 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.68□□□□□ -1.18
GPC3-204ENST00000631057 PLAGL1Q9UM63 463 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 SNX8Q9Y5X2 465 aa7.68□□□□□ -1.18
GPC3-204ENST00000631057 ISPDA4D126 451 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 TMEM247A6NEH6 219 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 METTL15A6NJ78 407 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 SAGE2PA6NJ88 616 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 ZAR1LA6NP61 321 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 J3KTA2 159 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 PLPP1O14494 284 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 SH3BP5O60239 455 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 OXSR1O95747 527 aaPredicted RBP7.67□□□□□ -1.18
GPC3-204ENST00000631057 ADAP00813 363 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 STSP08842 583 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 ADORA3P0DMS8 318 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 BSGP35613 385 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 ALDH9A1P49189 494 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 NUDT6P53370 316 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 CRISP1P54107 249 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 MANFP55145 182 aaKnown RBP7.67□□□□□ -1.18
GPC3-204ENST00000631057 SMIM11AP58511 58 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 REEP5Q00765 189 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.67□□□□□ -1.18
GPC3-204ENST00000631057 ST3GAL4Q11206 333 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 HEPACAMQ14CZ8 416 aa7.67□□□□□ -1.18
GPC3-204ENST00000631057 TIMM50Q3ZCQ8 353 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms