RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 INSM1Q01101 510 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 CAPRIN1Q14444 709 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 ANKRD46Q86W74 232 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 BPHLQ86WA6 291 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 GPR135Q8IZ08 494 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 CLECL1Q8IZS7 167 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 VPS37AQ8NEZ2 397 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 DNAJB14Q8TBM8 379 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 PHF12Q96QT6 1004 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 OR6C1Q96RD1 312 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 SLC39A3Q9BRY0 314 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 MMADHCQ9H3L0 296 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 IL1RL2Q9HB29 575 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 SLAMF7Q9NQ25 335 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 SLC35C2Q9NQQ7 365 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 SLC6A13Q9NSD5 602 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 ACSS1Q9NUB1 689 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 SLC25A37Q9NYZ2 338 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 C5AR2Q9P296 337 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 TMEM181Q9P2C4 612 aa13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 TMEM184BQ9Y519 407 aaPredicted RBP13.91□□□□□ -0.18
SHKBP1-211ENST00000595945 MYO1GB0I1T2 1018 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 DLL1O00548 723 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 PDPK1O15530 556 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 ZCCHC18P0CG32 403 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 FGF5P12034 268 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 RNH1P13489 461 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 EFNA1P20827 205 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 CSTF2P33240 577 aaKnown RBP eCLIP13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 SHC2P98077 582 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 PLIN5Q00G26 463 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 MC2RQ01718 297 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 COL9A2Q14055 689 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 MLC1Q15049 377 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 GTDC1Q4AE62 458 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 RUNDC3AQ59EK9 446 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 PRAMEF17Q5VTA0 474 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 OR52E8Q6IFG1 317 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 NANOGP8Q6NSW7 305 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 BNC2Q6ZN30 1099 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 MED25Q71SY5 747 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 ASCL5Q7RTU5 278 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 SLC15A3Q8IY34 581 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 ARHGAP24Q8N264 748 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 AGBL5Q8NDL9 886 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 TMEM52Q8NDY8 209 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 ADAMTS18Q8TE60 1221 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 TMEM125Q96AQ2 219 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 MCUR1Q96AQ8 359 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 EXOSC8Q96B26 276 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 ZNF681Q96N22 645 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 ANKRD27Q96NW4 1050 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 CDRT15Q96T59 188 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 PHOX2BQ99453 314 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 NDC1Q9BTX1 674 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 THTPAQ9BU02 230 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 NANOGQ9H9S0 305 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 CMTM6Q9NX76 183 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 VAPAQ9P0L0 249 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 UTS2RQ9UKP6 389 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 RARRES3Q9UL19 164 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 SRPK3Q9UPE1 567 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 PCDHB14Q9Y5E9 798 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 GMEB1Q9Y692 573 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 SPACA6W5XKT8 324 aa13.9□□□□□ -0.18
SHKBP1-211ENST00000595945 C15orf38-AP3S2A0A0A6YYH1 394 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 A0A1B0GX78 115 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 A0A1W2PRB8 838 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 GLOD5A6NK44 160 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 EFCAB7A8K855 629 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 RFXANKO14593 260 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 CPSF4O95639 269 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 C6orf47O95873 294 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 TLX1P31314 330 aaPredicted RBP13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 CEACAM7Q14002 265 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 TRIP6Q15654 476 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 PIGGQ5H8A4 983 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 C6orf10Q5SRN2 563 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 RHBDD2Q6NTF9 364 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 TTLL10Q6ZVT0 673 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 ARPINQ7Z6K5 226 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 ULK2Q8IYT8 1036 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 OR8J3Q8NGG0 315 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 PSMA8Q8TAA3 256 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 OR5P2Q8WZ92 322 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 CNRIP1Q96F85 164 aaPredicted RBP13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 CLPTM1LQ96KA5 538 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 RAB3IPQ96QF0 476 aaPredicted RBP13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 CPPED1Q9BRF8 314 aaPredicted RBP13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 RPF2Q9H7B2 306 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 SPAG4Q9NPE6 437 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 FBXO8Q9NRD0 319 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 HCN3Q9P1Z3 774 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 CD300AQ9UGN4 299 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 CDC14AQ9UNH5 594 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 RRP15Q9Y3B9 282 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 PCDHB3Q9Y5E6 796 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 PTPRBP23467 1997 aa13.89□□□□□ -0.19
SHKBP1-211ENST00000595945 BLACEA4D250 179 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 184.3 ms