RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 PAPD4Q6PIY7 484 aaKnown RBP11.83□□□□□ -0.52
RETREG3-203ENST00000585894 TRIM46Q7Z4K8 759 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 DDIASQ8IXT1 998 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 ZNF595Q8IYB9 648 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 CLYBLQ8N0X4 340 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 GALNT16Q8N428 558 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 CLEC1AQ8NC01 280 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 ADAMTS18Q8TE60 1221 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 NACC2Q96BF6 587 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 ANKRD9Q96BM1 317 aaPredicted RBP11.83□□□□□ -0.52
RETREG3-203ENST00000585894 PPP1R36Q96LQ0 422 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 UBL7Q96S82 380 aaPredicted RBP11.83□□□□□ -0.52
RETREG3-203ENST00000585894 NUDT9Q9BW91 350 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 RPF2Q9H7B2 306 aaKnown RBP11.83□□□□□ -0.52
RETREG3-203ENST00000585894 PNO1Q9NRX1 252 aaKnown RBP11.83□□□□□ -0.52
RETREG3-203ENST00000585894 LYARQ9NX58 379 aaKnown RBP11.83□□□□□ -0.52
RETREG3-203ENST00000585894 C5AR2Q9P296 337 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 PHF11Q9UIL8 331 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 MRPS33Q9Y291 106 aaKnown RBP11.83□□□□□ -0.52
RETREG3-203ENST00000585894 MMACHCQ9Y4U1 282 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 POLR3HQ9Y535 204 aaPredicted RBP11.83□□□□□ -0.52
RETREG3-203ENST00000585894 SPACA6W5XKT8 324 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 HMGB1P1B2RPK0 211 aaPredicted RBP11.83□□□□□ -0.52
RETREG3-203ENST00000585894 TMEM114B3SHH9 223 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 CLDN4O14493 209 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 PGRMC2O15173 223 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 PCDH7O60245 1069 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 PRB1P04280 392 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 FGF4P08620 206 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 NR2F6P10588 404 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 SERPINB5P36952 375 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 SLC18A1P54219 525 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 HSD17B7P56937 341 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 FOLH1Q04609 750 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 ACTN3Q08043 901 aaPredicted RBP11.83□□□□□ -0.52
RETREG3-203ENST00000585894 STX3Q13277 289 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 COLEC12Q5KU26 742 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 FAM180BQ6P0A1 224 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 Q6ZSR9 355 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 PAGE2Q7Z2X7 111 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 THOC3Q96J01 351 aaKnown RBP11.83□□□□□ -0.52
RETREG3-203ENST00000585894 IMMP1LQ96LU5 166 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 C3orf30Q96M34 536 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 ATP13A2Q9NQ11 1180 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 RIC8BQ9NVN3 520 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 NMRK1Q9NWW6 199 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 GPR83Q9NYM4 423 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 C19orf25Q9UFG5 118 aaPredicted RBP11.83□□□□□ -0.52
RETREG3-203ENST00000585894 ADAM29Q9UKF5 820 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 TP53TG5Q9Y2B4 290 aa11.83□□□□□ -0.52
RETREG3-203ENST00000585894 CNTRLQ7Z7A1 2325 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 ATP6AP2A0A1C7CYW4 349 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 GNG14A0A1W2PPG7 69 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 A0A1W2PQ72 361 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 SERTM1A2A2V5 107 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 ATXN7O15265 892 aaPredicted RBP11.82□□□□□ -0.52
RETREG3-203ENST00000585894 CTNSO60931 367 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 ATP6AP2O75787 350 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 CHEK2O96017 543 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 ITGAMP11215 1152 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 GRK2P25098 689 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 TIA1P31483 386 aaKnown RBP eCLIP11.82□□□□□ -0.528e-8■□□□□ 10.5
RETREG3-203ENST00000585894 BUD31P41223 144 aaPredicted RBP11.82□□□□□ -0.52
RETREG3-203ENST00000585894 ST13P50502 369 aaKnown RBP11.82□□□□□ -0.52
RETREG3-203ENST00000585894 STX4Q12846 297 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 AIMP2Q13155 320 aaKnown RBP11.82□□□□□ -0.52
RETREG3-203ENST00000585894 NR6A1Q15406 480 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 BTBD16Q32M84 506 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 ZNF750Q32MQ0 723 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 SPIN4Q56A73 249 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 NDUFAF5Q5TEU4 345 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 SIRT6Q8N6T7 355 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 CDC26Q8NHZ8 85 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 TM4SF18Q96CE8 201 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 SLC25A23Q9BV35 468 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 ALOXE3Q9BYJ1 711 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 PNPOQ9NVS9 261 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 HEY2Q9UBP5 337 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 SPTA1P02549 2419 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 SMG1Q96Q15 3661 aaKnown RBP11.82□□□□□ -0.52
RETREG3-203ENST00000585894 CPAMD8Q8IZJ3 1885 aa11.82□□□□□ -0.52
RETREG3-203ENST00000585894 MKRN2OSH3BPM6 223 aa11.81□□□□□ -0.52
RETREG3-203ENST00000585894 SLC28A1O00337 649 aa11.81□□□□□ -0.52
RETREG3-203ENST00000585894 SEC22BO75396 215 aa11.81□□□□□ -0.52
RETREG3-203ENST00000585894 CEACAM4O75871 244 aa11.81□□□□□ -0.52
RETREG3-203ENST00000585894 MYO1DO94832 1006 aa11.81□□□□□ -0.52
RETREG3-203ENST00000585894 IFNA16P05015 189 aa11.81□□□□□ -0.52
RETREG3-203ENST00000585894 CYC1P08574 325 aa11.81□□□□□ -0.52
RETREG3-203ENST00000585894 IL3P08700 152 aa11.81□□□□□ -0.52
RETREG3-203ENST00000585894 PRR35P0CG20 571 aa11.81□□□□□ -0.52
RETREG3-203ENST00000585894 TLX1P31314 330 aaPredicted RBP11.81□□□□□ -0.52
RETREG3-203ENST00000585894 PTGER1P34995 402 aa11.81□□□□□ -0.52
RETREG3-203ENST00000585894 ALDH9A1P49189 494 aa11.81□□□□□ -0.52
RETREG3-203ENST00000585894 TAS2R50P59544 299 aa11.81□□□□□ -0.52
RETREG3-203ENST00000585894 RPL38P63173 70 aaKnown RBP11.81□□□□□ -0.52
RETREG3-203ENST00000585894 ZNF33BQ06732 778 aa11.81□□□□□ -0.52
RETREG3-203ENST00000585894 PDCD2Q16342 344 aaPredicted RBP11.81□□□□□ -0.52
RETREG3-203ENST00000585894 GALNTL6Q49A17 601 aa11.81□□□□□ -0.52
RETREG3-203ENST00000585894 SOWAHCQ53LP3 525 aaPredicted RBP11.81□□□□□ -0.52
RETREG3-203ENST00000585894 FCRLBQ6BAA4 426 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms