RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 DCDC1P59894 354 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 GBE1Q04446 702 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 MTM1Q13496 603 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 MOGSQ13724 837 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 COL9A3Q14050 684 aaPredicted RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 ABRAXAS2Q15018 415 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 PRSS48Q7RTY5 328 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 CARM1Q86X55 608 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 OR8H3Q8N146 312 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 NXPE1Q8N323 547 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 EID2Q8N6I1 236 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 EXOSC8Q96B26 276 aaKnown RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 NAA11Q9BSU3 229 aaPredicted RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 ACOT13Q9NPJ3 140 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 ASB6Q9NWX5 421 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 EVLQ9UI08 416 aaPredicted RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 DGKBQ9Y6T7 804 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 PRSS51A0A1B0GVH4 220 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 TRBC2A0A5B9 178 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 C1orf226A1L170 272 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 TMEM8BA6NDV4 472 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 SLC22A31A6NKX4 558 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 GJE1A6NN92 205 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 ZNF726A6NNF4 738 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 PIRO00625 290 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 KLK10O43240 276 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 EMC8O43402 210 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 ADAM23O75077 832 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 ADAP00813 363 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 FGF3P11487 239 aaPredicted RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 CD1DP15813 335 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 C14orf28Q4W4Y0 310 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 PPM1JQ5JR12 505 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 TOR1AIP1Q5JTV8 583 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 MARCH9Q86YJ5 346 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 MRPL43Q8N983 215 aaKnown RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 OR10H4Q8NGA5 316 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 HTRA1Q92743 480 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 FAM136AQ96C01 138 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 RBM18Q96H35 190 aaKnown RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 TBATAQ96M53 351 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 TWSG1Q9GZX9 223 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 PCDHGA5Q9Y5G8 931 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 WNT6Q9Y6F9 365 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 MRPL42Q9Y6G3 142 aaKnown RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 ZNF891A8MT65 544 aaPredicted RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 SCAMP2O15127 329 aaKnown RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 UGT1A9O60656 530 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 KCNK5O95279 499 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 CRYBA1P05813 215 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 FCER2P06734 321 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 MSL3P1P0C860 447 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 PABPC4LP0CB38 370 aaKnown RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 GP1BBP13224 206 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 TYRP14679 529 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 UGT1A6P19224 532 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 C5AR1P21730 350 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 UGT1A4P22310 534 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 HTR2AP28223 471 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 CSKP41240 450 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 KLF1Q13351 362 aaPredicted RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 TECRLQ5HYJ1 363 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 CLEC6AQ6EIG7 209 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 METAP1DQ6UB28 335 aaPredicted RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 SLC51AQ86UW1 340 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 GPR65Q8IYL9 337 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 C12orf29Q8N999 325 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 FOXRED1Q96CU9 486 aaPredicted RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 BTF3L4Q96K17 158 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 TRNT1Q96Q11 434 aaKnown RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 ALPK1Q96QP1 1244 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 NPY6RQ99463 290 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 TM6SF2Q9BZW4 377 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 AMBRA1Q9C0C7 1298 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 UGT1A7Q9HAW7 530 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 UGT1A10Q9HAW8 530 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 UGT1A8Q9HAW9 530 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 PACSIN3Q9UKS6 424 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 A0A0G2JMP0 313 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 A0A0U1RQJ8 604 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 TRAPPC6AO75865 159 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 TGM6O95932 706 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 GNAO1P09471 354 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 LINGO3P0C6S8 592 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 IL7RP16871 459 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 GSK3BP49841 420 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 CLCNKBP51801 687 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 ARSFP54793 590 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 CYCSP99999 105 aaKnown RBP7.5□□□□□ -1.21
VPS13D-211ENST00000543710 VMACQ2NL98 169 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 CYBRD1Q53TN4 286 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 FAM76BQ5HYJ3 339 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 CFAP52Q8N1V2 620 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 UMODL1-AS1Q8N2C9 162 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 CCDC54Q8NEL0 328 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 OR4M2Q8NGB6 313 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 NEK7Q8TDX7 302 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 ADAD1Q96M93 576 aaKnown RBP7.5□□□□□ -1.21
VPS13D-211ENST00000543710 SPHK2Q9NRA0 654 aa7.5□□□□□ -1.21
VPS13D-211ENST00000543710 PIH1D1Q9NWS0 290 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms