RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 PELI2Q9HAT8 420 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 CNIH4Q9P003 139 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 VTI1BQ9UEU0 232 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 CAMK2AQ9UQM7 478 aa11.56□□□□□ -0.56
DDX41-215ENST00000512431 A0A1W2PPR1 153 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 TGFBR3LH3BV60 316 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 CTNSO60931 367 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 TRAPPC6AO75865 159 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 IFNA2P01563 188 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 F7P08709 466 aaPredicted RBP11.55□□□□□ -0.56
DDX41-215ENST00000512431 HPDP32754 393 aaPredicted RBP11.55□□□□□ -0.56
DDX41-215ENST00000512431 SLC1A2P43004 574 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 RPL21P46778 160 aaKnown RBP11.55□□□□□ -0.56
DDX41-215ENST00000512431 AP1S2P56377 157 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 REEP5Q00765 189 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 ASPHQ12797 758 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 SERTAD2Q14140 314 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 EFTUD2Q15029 972 aaKnown RBP eCLIP11.55□□□□□ -0.561e-6■■■■■ 28.2
DDX41-215ENST00000512431 PIGGQ5H8A4 983 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 PRAMEF20Q5VT98 475 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 TMPRSS11BQ86T26 416 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 KIAA1328Q86T90 577 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 TMEM52Q8NDY8 209 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 C7orf57Q8NEG2 295 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 PAQR8Q8TEZ7 354 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 PTPMT1Q8WUK0 201 aaPredicted RBP11.55□□□□□ -0.56
DDX41-215ENST00000512431 ZNF669Q96BR6 464 aaPredicted RBP11.55□□□□□ -0.56
DDX41-215ENST00000512431 LACRTQ9GZZ8 138 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 HOMER3Q9NSC5 361 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 TAS2R13Q9NYV9 303 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 JKAMPQ9P055 326 aa11.55□□□□□ -0.56
DDX41-215ENST00000512431 ARHGAP21Q5T5U3 1957 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 A0A0G2JN53 185 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 MYOCOSA0A1B0GUC4 107 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 CD8B2A6NJW9 211 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 C17orf105B2RV13 164 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 KDM4EB2RXH2 506 aaPredicted RBP11.54□□□□□ -0.56
DDX41-215ENST00000512431 ERI3O43414 337 aaKnown RBP11.54□□□□□ -0.56
DDX41-215ENST00000512431 DYRK3O43781 588 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 ZNF354AO60765 605 aaPredicted RBP11.54□□□□□ -0.56
DDX41-215ENST00000512431 H2AFYO75367 372 aaKnown RBP11.54□□□□□ -0.56
DDX41-215ENST00000512431 HAUS5O94927 633 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 TMIGD3P0DMS9 266 aaPredicted RBP11.54□□□□□ -0.56
DDX41-215ENST00000512431 TPSB2P20231 275 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 ANP32AP39687 249 aaKnown RBP11.54□□□□□ -0.56
DDX41-215ENST00000512431 HNRNPFP52597 415 aaKnown RBP11.54□□□□□ -0.56
DDX41-215ENST00000512431 CRYZQ08257 329 aaKnown RBP11.54□□□□□ -0.56
DDX41-215ENST00000512431 RCAN2Q14206 197 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 TPSAB1Q15661 275 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 ACKR1Q16570 336 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 ZNF791Q3KP31 576 aaPredicted RBP11.54□□□□□ -0.56
DDX41-215ENST00000512431 HMBOX1Q6NT76 420 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 PODNL1Q6PEZ8 512 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 NXPE4Q6UWF7 544 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 SYDE1Q6ZW31 735 aaPredicted RBP11.54□□□□□ -0.56
DDX41-215ENST00000512431 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.54□□□□□ -0.569e-7■■■■■ 51.2
DDX41-215ENST00000512431 KLHDC8AQ8IYD2 350 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 DND1Q8IYX4 353 aaKnown RBP11.54□□□□□ -0.56
DDX41-215ENST00000512431 SLC15A4Q8N697 577 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 ZNF321PQ8N8H1 164 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 FAM13CQ8NE31 585 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 TTLQ8NG68 377 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 SLC2A12Q8TD20 617 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 TMEM158Q8WZ71 300 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 CCT6BQ92526 530 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 FBXL8Q96CD0 374 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 LINGO1Q96FE5 620 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 HES6Q96HZ4 224 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 DOHHQ9BU89 302 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 PRDM14Q9GZV8 571 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 COPS7BQ9H9Q2 264 aaPredicted RBP11.54□□□□□ -0.56
DDX41-215ENST00000512431 CALHM2Q9HA72 323 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 FBXO5Q9UKT4 447 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 CLDN16Q9Y5I7 305 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 KCNE2Q9Y6J6 123 aa11.54□□□□□ -0.56
DDX41-215ENST00000512431 HIVEP2P31629 2446 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 MBD3L4A6NDZ8 208 aaPredicted RBP11.53□□□□□ -0.56
DDX41-215ENST00000512431 MBD3L3A6NE82 208 aaPredicted RBP11.53□□□□□ -0.56
DDX41-215ENST00000512431 MBD3L5A6NJ08 208 aaPredicted RBP11.53□□□□□ -0.56
DDX41-215ENST00000512431 LRRC3CA6NJW4 275 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 C4orf51C9J302 202 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 CNOT4O95628 575 aaKnown RBP11.53□□□□□ -0.56
DDX41-215ENST00000512431 GUCA1CO95843 209 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 C1QAP02745 245 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 COX7A2P14406 83 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 SERPINB3P29508 390 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 IL2P60568 153 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 CCNG2Q16589 344 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 TBCELQ5QJ74 424 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 TRIM40Q6P9F5 258 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 PAQR3Q6TCH7 311 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 LUZP2Q86TE4 346 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 THOC6Q86W42 341 aaKnown RBP11.53□□□□□ -0.56
DDX41-215ENST00000512431 TXLNBQ8N3L3 684 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 MBD3L2Q8NHZ7 208 aaPredicted RBP11.53□□□□□ -0.56
DDX41-215ENST00000512431 NUBPLQ8TB37 319 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 SPACA9Q96E40 222 aaPredicted RBP11.53□□□□□ -0.56
DDX41-215ENST00000512431 ZNF597Q96LX8 424 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 SERINC2Q96SA4 455 aa11.53□□□□□ -0.56
DDX41-215ENST00000512431 WDR83Q9BRX9 315 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms