RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 FCRLBQ6BAA4 426 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 MRM1Q6IN84 353 aaKnown RBP12.06□□□□□ -0.48
COL5A1-206ENST00000465877 H3F3CQ6NXT2 135 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 GPR180Q86V85 440 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 CRLF3Q8IUI8 442 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 SLC5A8Q8N695 610 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 APCDD1LQ8NCL9 501 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 NFAM1Q8NET5 270 aaPredicted RBP12.06□□□□□ -0.48
COL5A1-206ENST00000465877 B3GNT7Q8NFL0 401 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 ELP5Q8TE02 316 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 MIB2Q96AX9 1013 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 FAM111AQ96PZ2 611 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 LMF1Q96S06 567 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 SMC6Q96SB8 1091 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 NPAS2Q99743 824 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 RPF2Q9H7B2 306 aaKnown RBP12.06□□□□□ -0.48
COL5A1-206ENST00000465877 PNO1Q9NRX1 252 aaKnown RBP12.06□□□□□ -0.48
COL5A1-206ENST00000465877 MS4A12Q9NXJ0 267 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 PLLPQ9Y342 182 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 ATG4BQ9Y4P1 393 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 TRBV11-1A0A0K0K1C0 115 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 UBFD1O14562 309 aaKnown RBP12.05□□□□□ -0.48
COL5A1-206ENST00000465877 FGF17O60258 216 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 SPAG7O75391 227 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 AIFM1O95831 613 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 WDPCPO95876 746 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 IFNA16P05015 189 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 FAM58BPP0C7Q3 252 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 HSD3B1P14060 373 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 CPA3P15088 417 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 HSD3B2P26439 372 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 TPP2P29144 1249 aaPredicted RBP12.05□□□□□ -0.48
COL5A1-206ENST00000465877 TNFSF10P50591 281 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 NAGLUP54802 743 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 IGLV3-21P80748 117 aaPredicted RBP12.05□□□□□ -0.48
COL5A1-206ENST00000465877 FOXK1P85037 733 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 ID2Q02363 134 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 GALNT1Q10472 559 aaPredicted RBP12.05□□□□□ -0.48
COL5A1-206ENST00000465877 SERTAD2Q14140 314 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 TLR1Q15399 786 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 MEP1AQ16819 746 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 PLEKHN1Q494U1 663 aaPredicted RBP12.05□□□□□ -0.48
COL5A1-206ENST00000465877 CFAP157Q5JU67 520 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 C18orf63Q68DL7 685 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 PAGE2Q7Z2X7 111 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 COMMD6Q7Z4G1 85 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 C10orf107Q8IVU9 208 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 LGI4Q8N135 537 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 BEST3Q8N1M1 668 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 METTL4Q8N3J2 472 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 OR14A16Q8NHC5 309 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 DNAJB14Q8TBM8 379 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 METTL6Q8TCB7 284 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 NCLNQ969V3 563 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 VMP1Q96GC9 406 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 ZNF354BQ96LW1 612 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 MID1IP1Q9NPA3 183 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 TEX10Q9NXF1 929 aaPredicted RBP12.05□□□□□ -0.48
COL5A1-206ENST00000465877 PLA2G3Q9NZ20 509 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 AHSPQ9NZD4 102 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 SENP1Q9P0U3 644 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 ZNF223Q9UK11 482 aaPredicted RBP12.05□□□□□ -0.48
COL5A1-206ENST00000465877 ADAM29Q9UKF5 820 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 ASB4Q9Y574 426 aa12.05□□□□□ -0.48
COL5A1-206ENST00000465877 MYOCOSA0A1B0GUC4 107 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 ARHGAP10A1A4S6 786 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 CCDC151A5D8V7 595 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 OR5H15A6NDH6 313 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 H3BQF6 201 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 PROM1O43490 865 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 MAN1A2O60476 641 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 WISP1O95388 367 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 KLK1P06870 262 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 TLX1P31314 330 aaPredicted RBP12.04□□□□□ -0.48
COL5A1-206ENST00000465877 FOXA1P55317 472 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 PLIN5Q00G26 463 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 FOLH1Q04609 750 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 TBL3Q12788 808 aaKnown RBP12.04□□□□□ -0.48
COL5A1-206ENST00000465877 INPP5JQ15735 1006 aaPredicted RBP12.04□□□□□ -0.48
COL5A1-206ENST00000465877 IGFBP7Q16270 282 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 ACER2Q5QJU3 275 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 OR52E8Q6IFG1 317 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 TMEM132CQ8N3T6 1108 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 DAZLQ92904 295 aaKnown RBP12.04□□□□□ -0.48
COL5A1-206ENST00000465877 ANKRD9Q96BM1 317 aaPredicted RBP12.04□□□□□ -0.48
COL5A1-206ENST00000465877 ZIM3Q96PE6 472 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 ALOXE3Q9BYJ1 711 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 ACPTQ9BZG2 426 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 WDR41Q9HAD4 459 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 ABI3Q9P2A4 366 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 MAP10Q9P2G4 905 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 SLC17A7Q9P2U7 560 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 VTI1BQ9UEU0 232 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 PPIEQ9UNP9 301 aaKnown RBP12.04□□□□□ -0.48
COL5A1-206ENST00000465877 TIMM22Q9Y584 194 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 CLCA3PQ9Y6N3 262 aa12.04□□□□□ -0.48
COL5A1-206ENST00000465877 CROCCQ5TZA2 2017 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 A0A1W2PR48 441 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 GABRR3A8MPY1 467 aa12.03□□□□□ -0.48
COL5A1-206ENST00000465877 C17orf105B2RV13 164 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms