RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	GOLGA6L10	A6NI86	522 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	TBX6	O95947	436 aa	Predicted RBP	11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	KRT6A	P02538	564 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	GBA	P04062	536 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	KRT6B	P04259	564 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	IFNA16	P05015	189 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	STS	P08842	583 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	HIST1H1T	P22492	207 aa	Predicted RBP	11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	ATP5A1	P25705	553 aa	Known RBP	11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	KRT6C	P48668	564 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	NAGLU	P54802	743 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	LIM2	P55344	173 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	RHAG	Q02094	409 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	SLC18A2	Q05940	514 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	LCP2	Q13094	533 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	ADPRM	Q3LIE5	342 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	TCHHL1	Q5QJ38	904 aa	Predicted RBP	11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	DEPDC1	Q5TB30	811 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	PLAG1	Q6DJT9	500 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	OR4C11	Q6IEV9	310 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	H3F3C	Q6NXT2	135 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	PAPD4	Q6PIY7	484 aa	Known RBP	11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	ZNF793	Q6ZN11	406 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	NUDT13	Q86X67	352 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	C10orf107	Q8IVU9	208 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	SIRT6	Q8N6T7	355 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	ACOT4	Q8N9L9	421 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	OR1N1	Q8NGS0	311 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	PPP1R14C	Q8TAE6	165 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	WDR20	Q8TBZ3	569 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	METTL6	Q8TCB7	284 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	NR4A3	Q92570	626 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	L3HYPDH	Q96EM0	354 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	QRFPR	Q96P65	431 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	ZNF382	Q96SR6	550 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	CSF3R	Q99062	836 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	SERPINI1	Q99574	410 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	LPAR4	Q99677	370 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	MAPKAP1	Q9BPZ7	522 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	C1QTNF3	Q9BXJ4	246 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	CLK4	Q9HAZ1	481 aa	Known RBP	11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	PRDM9	Q9NQV7	894 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	PRDM7	Q9NQW5	492 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	LANCL2	Q9NS86	450 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	FARSB	Q9NSD9	589 aa	Known RBP	11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	OLAH	Q9NV23	265 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	SLC17A7	Q9P2U7	560 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	CACNA1D	Q01668	2161 aa		11.91	□□□□□ -0.5
FDPS-204	ENST00000461507	OR5H15	A6NDH6	313 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507		A8MUI8	341 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	PLPP1	O14494	284 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	ETHE1	O95571	254 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	WDPCP	O95876	746 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	PDYN	P01213	254 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	NEFH	P12036	1026 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	ID2	Q02363	134 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	PCDH1	Q08174	1060 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	ASPH	Q12797	758 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	STX4	Q12846	297 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	SLAMF1	Q13291	335 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	E2F2	Q14209	437 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	IMPG1	Q17R60	797 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	GGTA1P	Q4G0N0	100 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	LIPM	Q5VYY2	423 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	SCIMP	Q6UWF3	145 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	QSOX2	Q6ZRP7	698 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	SH2D5	Q6ZV89	423 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	UBE3D	Q7Z6J8	389 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	BANP	Q8N9N5	519 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	PLPP5	Q8NEB5	264 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	TCP10L	Q8TDR4	215 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	KCNA7	Q96RP8	456 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	MECR	Q9BV79	373 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	MRPL1	Q9BYD6	325 aa	Known RBP	11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	GSTO2	Q9H4Y5	243 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	KCNK9	Q9NPC2	374 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	PLA2G3	Q9NZ20	509 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	AHSP	Q9NZD4	102 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	SENP1	Q9P0U3	644 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	ABI3	Q9P2A4	366 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	PHF11	Q9UIL8	331 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	DAPP1	Q9UN19	280 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	PLLP	Q9Y342	182 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	TIMM22	Q9Y584	194 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	PCDHGB6	Q9Y5F9	930 aa		11.9	□□□□□ -0.5
FDPS-204	ENST00000461507	FOXE1	O00358	373 aa	Predicted RBP	11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	MANBA	O00462	879 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	CREB1	P16220	341 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	TNNI3	P19429	210 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	TLX1	P31314	330 aa	Predicted RBP	11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	DCT	P40126	519 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	BUD31	P41223	144 aa	Predicted RBP	11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	HNRNPF	P52597	415 aa	Known RBP	11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	PKNOX1	P55347	436 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	PER3	P56645	1201 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	BTK	Q06187	659 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	PCLAF	Q15004	111 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	ABHD17B	Q5VST6	288 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	FRMD7	Q6ZUT3	714 aa		11.89	□□□□□ -0.51
FDPS-204	ENST00000461507	PAGE2	Q7Z2X7	111 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 92 ms