RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 PCDHGB2Q9Y5G2 931 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 ASCC3Q8N3C0 2202 aaKnown RBP19.68■□□□□ 0.74
PNKP-203ENST00000593946 SPEGQ15772 3267 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 A0A1W2PQM1 296 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 PDPK1O15530 556 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 PRKRAO75569 313 aaKnown RBP19.68■□□□□ 0.74
PNKP-203ENST00000593946 BCAS2O75934 225 aaPredicted RBP19.68■□□□□ 0.74
PNKP-203ENST00000593946 ATP6V1G2O95670 118 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 C6orf47O95873 294 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 SEPHS1P49903 392 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 PCBP4P57723 403 aaKnown RBP19.68■□□□□ 0.74
PNKP-203ENST00000593946 TRAP1Q12931 704 aaKnown RBP19.68■□□□□ 0.74
PNKP-203ENST00000593946 RUNX2Q13950 521 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 CCNIQ14094 377 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 FLOT2Q14254 428 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 TCTE1Q5JU00 501 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 SNAP47Q5SQN1 464 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 C18orf63Q68DL7 685 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 TMEM71Q6P5X7 295 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 DBX2Q6ZNG2 339 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 ZNF621Q6ZSS3 439 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 TMPRSS9Q7Z410 1059 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 D2HGDHQ8N465 521 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 OR4A15Q8NGL6 344 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 PCDHAC1Q9H158 963 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 SLAMF7Q9NQ25 335 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 ENAMQ9NRM1 1142 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 DNAAF2Q9NVR5 837 aaKnown RBP19.68■□□□□ 0.74
PNKP-203ENST00000593946 DAPP1Q9UN19 280 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 AP3M1Q9Y2T2 418 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 NAALAD2Q9Y3Q0 740 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 GMEB1Q9Y692 573 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 A0A1W2PRB8 838 aa19.67■□□□□ 0.74
PNKP-203ENST00000593946 TOX3O15405 576 aaPredicted RBP19.67■□□□□ 0.74
PNKP-203ENST00000593946 CPNE6O95741 557 aa19.67■□□□□ 0.74
PNKP-203ENST00000593946 LIM2P55344 173 aa19.67■□□□□ 0.74
PNKP-203ENST00000593946 CCL7P80098 99 aa19.67■□□□□ 0.74
PNKP-203ENST00000593946 TNFRSF17Q02223 184 aa19.67■□□□□ 0.74
PNKP-203ENST00000593946 BNIP2Q12982 314 aa19.67■□□□□ 0.74
PNKP-203ENST00000593946 KCNAB1Q14722 419 aa19.67■□□□□ 0.74
PNKP-203ENST00000593946 FAM180BQ6P0A1 224 aa19.67■□□□□ 0.74
PNKP-203ENST00000593946 EXOSC8Q96B26 276 aaKnown RBP19.67■□□□□ 0.74
PNKP-203ENST00000593946 C10orf90Q96M02 699 aa19.67■□□□□ 0.74
PNKP-203ENST00000593946 KCTD14Q9BQ13 255 aaPredicted RBP19.67■□□□□ 0.74
PNKP-203ENST00000593946 THUMPD3Q9BV44 507 aaKnown RBP19.67■□□□□ 0.74
PNKP-203ENST00000593946 ZNF768Q9H5H4 540 aaKnown RBP19.67■□□□□ 0.74
PNKP-203ENST00000593946 KAT8Q9H7Z6 458 aaKnown RBP19.67■□□□□ 0.74
PNKP-203ENST00000593946 LYRM4Q9HD34 91 aa19.67■□□□□ 0.74
PNKP-203ENST00000593946 CES1P1Q9UKY3 287 aa19.67■□□□□ 0.74
PNKP-203ENST00000593946 ATXN7L1Q9ULK2 861 aaPredicted RBP19.67■□□□□ 0.74
PNKP-203ENST00000593946 VPS4AQ9UN37 437 aa19.67■□□□□ 0.74
PNKP-203ENST00000593946 PCDHGB4Q9UN71 923 aa19.67■□□□□ 0.74
PNKP-203ENST00000593946 PGRMC2O15173 223 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 NVLO15381 856 aaKnown RBP19.66■□□□□ 0.74
PNKP-203ENST00000593946 RPLP0P05388 317 aaKnown RBP19.66■□□□□ 0.74
PNKP-203ENST00000593946 MSL3P1P0C860 447 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 NR2F6P10588 404 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 NELFEP18615 380 aaKnown RBP19.66■□□□□ 0.74
PNKP-203ENST00000593946 DUSP3P51452 185 aaPredicted RBP19.66■□□□□ 0.74
PNKP-203ENST00000593946 DAB2P98082 770 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 GAB1Q13480 694 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 FXNQ16595 210 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 SLC48A1Q6P1K1 146 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 ZNF574Q6ZN55 896 aaPredicted RBP19.66■□□□□ 0.74
PNKP-203ENST00000593946 GPR155Q7Z3F1 870 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 PTRH1Q86Y79 214 aaKnown RBP19.66■□□□□ 0.74
PNKP-203ENST00000593946 IFI44Q8TCB0 444 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 JADE3Q92613 823 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 ZNF583Q96ND8 569 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 ECSITQ9BQ95 431 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 LRRN3Q9H3W5 708 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 SLC35C2Q9NQQ7 365 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 MS4A12Q9NXJ0 267 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 TAS2R9Q9NYW1 312 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 PDP2Q9P2J9 529 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 ZNF282Q9UDV7 671 aaPredicted RBP19.66■□□□□ 0.74
PNKP-203ENST00000593946 UTS2RQ9UKP6 389 aa19.66■□□□□ 0.74
PNKP-203ENST00000593946 FITM1A5D6W6 292 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 ZNF860A6NHJ4 632 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 GLOD5A6NK44 160 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 H3BMH7 237 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 CLIC1O00299 241 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 DNAJB6O75190 326 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 MED26O95402 600 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 RETP07949 1114 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 BUD31P41223 144 aaPredicted RBP19.65■□□□□ 0.74
PNKP-203ENST00000593946 GRK6P43250 576 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 ARL4DP49703 201 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 NDUFA9Q16795 377 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 INAVAQ3KP66 663 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 GARNL3Q5VVW2 1013 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 IFNEQ86WN2 208 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 OR4D9Q8NGE8 314 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 N4BP2L2Q92802 583 aaPredicted RBP19.65■□□□□ 0.74
PNKP-203ENST00000593946 NPLQ9BXD5 320 aaPredicted RBP19.65■□□□□ 0.74
PNKP-203ENST00000593946 TRIM4Q9C037 500 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 ANKHQ9HCJ1 492 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 ACSS1Q9NUB1 689 aaPredicted RBP19.65■□□□□ 0.74
PNKP-203ENST00000593946 WASHC1A8K0Z3 465 aa19.65■□□□□ 0.74
PNKP-203ENST00000593946 A8MU76 341 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms