RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 TPGS1Q6ZTW0 290 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 SLC30A8Q8IWU4 369 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 TAGAPQ8N103 731 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 C19orf18Q8NEA5 215 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 NLGN4YQ8NFZ3 816 aaPredicted RBP16.82■□□□□ 0.28
RAB40C-205ENST00000539661 UCK2Q9BZX2 261 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 C1GALT1Q9NS00 363 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 ATP6V1HQ9UI12 483 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 MGAT4DA6NG13 374 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 H0YIV9 168 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 AP2A2O94973 939 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 FHP07954 510 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 OR56A5P0C7T3 313 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 PRKAR1AP10644 381 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 SRCP12931 536 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 CDK6Q00534 326 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 ZNF91Q05481 1191 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.82■□□□□ 0.28
RAB40C-205ENST00000539661 ADGRF1Q5T601 910 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 LIPKQ5VXJ0 399 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 TRIQKQ629K1 86 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 C16orf59Q7L2K0 433 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 BHMTQ93088 406 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 KCTD7Q96MP8 289 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 NELL2Q99435 816 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 REV1Q9UBZ9 1251 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 TMCC3Q9ULS5 477 aa16.82■□□□□ 0.28
RAB40C-205ENST00000539661 FCF1Q9Y324 198 aaKnown RBP16.82■□□□□ 0.28
RAB40C-205ENST00000539661 SCN10AQ9Y5Y9 1956 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 PRAMEF33A0A0G2JMD5 474 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 SLC38A8A6NNN8 435 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 WWP2O00308 870 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 PLD2O14939 933 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 PRAMEF10O60809 474 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 IFNW1P05000 195 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 CD22P20273 847 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 CORO1AP31146 461 aaKnown RBP16.81■□□□□ 0.28
RAB40C-205ENST00000539661 SDC2P34741 201 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 IRS1P35568 1242 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 HNF1BP35680 557 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 THPOP40225 353 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 CLDN20P56880 219 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 PCBP3P57721 371 aaKnown RBP16.81■□□□□ 0.28
RAB40C-205ENST00000539661 MAB21L1Q13394 359 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 SPIN4Q56A73 249 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 BPHLQ86WA6 291 aaPredicted RBP16.81■□□□□ 0.28
RAB40C-205ENST00000539661 FAM217AQ8IXS0 508 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 SLC38A6Q8IZM9 456 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 SIX5Q8N196 739 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 OR4M1Q8NGD0 313 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 OR8J1Q8NGP2 316 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 MTERF1Q99551 399 aaKnown RBP16.81■□□□□ 0.28
RAB40C-205ENST00000539661 SLC35A5Q9BS91 424 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 PRRG3Q9BZD7 231 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 C11orf16Q9NQ32 467 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 DNAJC27Q9NZQ0 273 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 PHF11Q9UIL8 331 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 NDRG2Q9UN36 371 aaKnown RBP16.81■□□□□ 0.28
RAB40C-205ENST00000539661 MGAT4BQ9UQ53 548 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 STK25O00506 426 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 PITPNM1O00562 1244 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 SLC43A1O75387 559 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 KLKB1P03952 638 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 SLC2A2P11168 524 aaPredicted RBP16.81■□□□□ 0.28
RAB40C-205ENST00000539661 GPR17Q13304 367 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 XKR6Q5GH73 641 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 GRHL2Q6ISB3 625 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 CASP12Q6UXS9 341 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 ANKK1Q8NFD2 765 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 SKA2Q8WVK7 121 aaPredicted RBP16.81■□□□□ 0.28
RAB40C-205ENST00000539661 AP2M1Q96CW1 435 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 COQ7Q99807 217 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 P2RY13Q9BPV8 354 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 SOSTQ9BQB4 213 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 CRISPLD1Q9H336 500 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 TRIM45Q9H8W5 580 aaPredicted RBP16.81■□□□□ 0.28
RAB40C-205ENST00000539661 DIMT1Q9UNQ2 313 aaKnown RBP16.81■□□□□ 0.28
RAB40C-205ENST00000539661 ANGPT4Q9Y264 503 aa16.81■□□□□ 0.28
RAB40C-205ENST00000539661 TRBC2A0A5B9 178 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 C2orf78A6NCI8 922 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 FAM157BP0CG42 384 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 CYP2A6P11509 494 aaPredicted RBP16.8■□□□□ 0.28
RAB40C-205ENST00000539661 ARPP19P56211 112 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 RRAS2P62070 204 aaPredicted RBP16.8■□□□□ 0.28
RAB40C-205ENST00000539661 FKBP1BP68106 108 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 BCL2L1Q07817 233 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 CRHR2Q13324 411 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 GANABQ14697 944 aaKnown RBP16.8■□□□□ 0.28
RAB40C-205ENST00000539661 ANGPT1Q15389 498 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 LAMTOR1Q6IAA8 161 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 TP53I13Q8NBR0 393 aaPredicted RBP16.8■□□□□ 0.28
RAB40C-205ENST00000539661 ARPC5LQ9BPX5 153 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 MARVELD1Q9BSK0 173 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 TSSK6Q9BXA6 273 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 PAK6Q9NQU5 681 aaPredicted RBP16.8■□□□□ 0.28
RAB40C-205ENST00000539661 TEKT2Q9UIF3 430 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 PRG3Q9Y2Y8 225 aaPredicted RBP16.8■□□□□ 0.28
RAB40C-205ENST00000539661 VWA8A3KMH1 1905 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 SOCS5O75159 536 aa16.8■□□□□ 0.28
RAB40C-205ENST00000539661 STC2O76061 302 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms