RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 C7orf57Q8NEG2 295 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 DPF1Q92782 380 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 NPLQ9BXD5 320 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-208ENST00000538570 MYOCOSA0A1B0GUC4 107 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 GRXCR1A8MXD5 290 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF30P17039 623 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 DNASE1P24855 282 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 C2orf76Q3KRA6 126 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 GDF6Q6KF10 455 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-208ENST00000538570 PLEKHG7Q6ZR37 379 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 SLAIN1Q8ND83 568 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 PSD4Q8NDX1 1056 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 FZD8Q9H461 694 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 ACTL8Q9H568 366 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-208ENST00000538570 ARMC1Q9NVT9 282 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 FAM53CQ9NYF3 392 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 SLC2A6Q9UGQ3 507 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 COQ4Q9Y3A0 265 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 CAMTA1Q9Y6Y1 1673 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 PMM2O15305 246 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 PDYNP01213 254 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 PRKAR1BP31321 381 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 LUMP51884 338 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-208ENST00000538570 POU4F2Q12837 409 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 BTN1A1Q13410 526 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 ATXN7L3Q14CW9 347 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-208ENST00000538570 ARHGAP40Q5TG30 622 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 RNF130Q86XS8 419 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 FAM109AQ8N4B1 249 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 ESX1Q8N693 406 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 NLGN2Q8NFZ4 835 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 NSMAFQ92636 917 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 RHBDF1Q96CC6 855 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 EXTL2Q9UBQ6 330 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 EBF1Q9UH73 591 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 DLGAP4Q9Y2H0 992 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 TIMM8BQ9Y5J9 83 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-208ENST00000538570 A0A1W2PRU2 124 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 STATHP02808 62 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 ADH5P11766 374 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 MAGEB1P43366 347 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 CLRN1P58418 232 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 NIPAL4Q0D2K0 466 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 UBXN2BQ14CS0 331 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 ABRAXAS2Q15018 415 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 PDGFRLQ15198 375 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 TMEM164Q5U3C3 297 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 TMPRSS9Q7Z410 1059 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 TMEM126BQ8IUX1 230 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 SCML4Q8N228 414 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 TMEM156Q8N614 296 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF675Q8TD23 568 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 SMARCD2Q92925 531 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 COL20A1Q9P218 1284 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 RNF11Q9Y3C5 154 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 CFAP20Q9Y6A4 193 aaKnown RBP9.59□□□□□ -0.87
COL4A6-208ENST00000538570 TEX51A0A1B0GUA7 166 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 RNF13O43567 381 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 POP7O75817 140 aaKnown RBP9.59□□□□□ -0.87
COL4A6-208ENST00000538570 TBX18O95935 607 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 F7P08709 466 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-208ENST00000538570 G0S2P27469 103 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 GNRHRP30968 328 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 HYAL2Q12891 473 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 FADDQ13158 208 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 PAN3Q58A45 887 aaKnown RBP9.59□□□□□ -0.87
COL4A6-208ENST00000538570 SPANXN4Q5MJ08 99 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 DCAF12L1Q5VU92 463 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 FBXL22Q6P050 247 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 OR10Q1Q8NGQ4 319 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 TMEM68Q96MH6 324 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 RDH12Q96NR8 316 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 MRM3Q9HC36 420 aaKnown RBP9.59□□□□□ -0.87
COL4A6-208ENST00000538570 PRSS51A0A1B0GVH4 220 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 J3KR12 359 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 HTRA2O43464 458 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-208ENST00000538570 TMEM127O75204 238 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 TRAPPC6AO75865 159 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 C8orf89P0DMQ9 161 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 DBPQ10586 325 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-208ENST00000538570 CHRFAM7AQ494W8 412 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 IGSF11Q5DX21 431 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 LRIF1Q5T3J3 769 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 REEP3Q6NUK4 255 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 TMIGD1Q6UXZ0 262 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 TIFABQ6ZNK6 161 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.58□□□□□ -0.88
COL4A6-208ENST00000538570 TSTD1Q8NFU3 115 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 OR2AP1Q8NGE2 309 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 OR14K1Q8NGZ2 314 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 MFSD8Q8NHS3 518 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 CYB5D2Q8WUJ1 264 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 MOAP1Q96BY2 351 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 RBP7Q96R05 134 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 SEZ6LQ9BYH1 1024 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 CD244Q9BZW8 370 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 NELFAQ9H3P2 528 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 PIGVQ9NUD9 493 aa9.58□□□□□ -0.88
COL4A6-208ENST00000538570 RHCGQ9UBD6 479 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms