RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 UBASH3AP57075 661 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 PFN3P60673 137 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 CNTN1Q12860 1018 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 BECN1Q14457 450 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 RASA2Q15283 850 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 TAZQ16635 292 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 C14orf28Q4W4Y0 310 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 SUSD4Q5VX71 490 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 ZNF677Q86XU0 584 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 SYT2Q8N9I0 419 aaPredicted RBP1.39□□□□□ -2.19
CCDC93-209ENST00000488908 SLC26A7Q8TE54 656 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 TEKT4Q8WW24 435 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 SDF4Q9BRK5 362 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 GHITMQ9H3K2 345 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 PHPT1Q9NRX4 125 aaPredicted RBP1.39□□□□□ -2.19
CCDC93-209ENST00000488908 NSMCE4AQ9NXX6 385 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 CPSF2Q9P2I0 782 aaKnown RBP1.39□□□□□ -2.19
CCDC93-209ENST00000488908 RCOR3Q9P2K3 495 aaPredicted RBP1.39□□□□□ -2.19
CCDC93-209ENST00000488908 ADD3Q9UEY8 706 aaKnown RBP1.39□□□□□ -2.19
CCDC93-209ENST00000488908 NSG2Q9Y328 171 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 GTF3C1Q12789 2109 aa1.39□□□□□ -2.19
CCDC93-209ENST00000488908 hCG_1807616A0A1W2PRN6 198 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 TCRBV21S2A2A0A5A6 115 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 MLNRO43193 412 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 ENTPD3O75355 529 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 SLC35E2P0CK97 266 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 OR3A3P47888 321 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 STK4Q13043 487 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 MAPK11Q15759 364 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 IL17AQ16552 155 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 ZNF542PQ5EBM4 170 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.38□□□□□ -2.19
CCDC93-209ENST00000488908 FAM205BPQ63HN1 556 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 ITPRIPL1Q6GPH6 555 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 TATDN1Q6P1N9 297 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 ABI3BPQ7Z7G0 1075 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 MFN1Q8IWA4 741 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 ARL14Q8N4G2 192 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 ANKRD13CQ8N6S4 541 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 SLC4A11Q8NBS3 891 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 CAMKVQ8NCB2 501 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 KIR2DL4Q99706 377 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 ALKBH7Q9BT30 221 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-209ENST00000488908 NMUR2Q9GZQ4 415 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 CCDC68Q9H2F9 335 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 SNX25Q9H3E2 840 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 DPEP2Q9H4A9 486 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 NT5DC2Q9H857 520 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 MRGBPQ9NV56 204 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 IMPAD1Q9NX62 359 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 TBC1D29Q9UFV1 150 aa1.38□□□□□ -2.19
CCDC93-209ENST00000488908 CHORDC1Q9UHD1 332 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-209ENST00000488908 TRAV18A0A075B6X5 111 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 A0A0U1RQK1 487 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 EFCAB7A8K855 629 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 ZNF324O75467 553 aaPredicted RBP1.37□□□□□ -2.19
CCDC93-209ENST00000488908 IGKV1-17P01599 117 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 HSD17B1P14061 328 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 PORP16435 677 aaPredicted RBP1.37□□□□□ -2.19
CCDC93-209ENST00000488908 PSMB1P20618 241 aaKnown RBP1.37□□□□□ -2.19
CCDC93-209ENST00000488908 PPP2R1BP30154 601 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 LIMK1P53667 647 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 GEMIN4P57678 1058 aaKnown RBP1.37□□□□□ -2.19
CCDC93-209ENST00000488908 PPA1Q15181 289 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 MEA1Q16626 185 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 C6orf136Q5SQH8 315 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 RFPL4BQ6ZWI9 263 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 CAMKMTQ7Z624 323 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 TLK2Q86UE8 772 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 ERI1Q8IV48 349 aaKnown RBP1.37□□□□□ -2.19
CCDC93-209ENST00000488908 ZNF491Q8N8L2 437 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 GRK7Q8WTQ7 553 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 P2RX5Q93086 422 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 CCDC106Q9BWC9 280 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 TRIM7Q9C029 511 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 HPS4Q9NQG7 708 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 BLOC1S4Q9NUP1 217 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 ZNF446Q9NWS9 450 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 NCKAP1Q9Y2A7 1128 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 CA5BQ9Y2D0 317 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 SNX8Q9Y5X2 465 aa1.37□□□□□ -2.19
CCDC93-209ENST00000488908 RSF1Q96T23 1441 aaPredicted RBP1.37□□□□□ -2.19
CCDC93-209ENST00000488908 EDDM13A0A1B0GTR0 161 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 hCG_1809904A0A1W2PP81 198 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 A0A1W2PPE2 198 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 A0A1W2PR64 198 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 NEDD8-MDP1E9PL57 170 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 PGRMC2O15173 223 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 SNAI2O43623 268 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 GJB5O95377 273 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 NNMTP40261 264 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 CSE1LP55060 971 aaKnown RBP1.36□□□□□ -2.19
CCDC93-209ENST00000488908 PSMC6P62333 389 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 IL10RBQ08334 325 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 ASAH1Q13510 395 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 EIF4EBP1Q13541 118 aaPredicted RBP1.36□□□□□ -2.19
CCDC93-209ENST00000488908 MPPED2Q15777 294 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 SGCBQ16585 318 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 QRICH1Q2TAL8 776 aa1.36□□□□□ -2.19
CCDC93-209ENST00000488908 WDR78Q5VTH9 848 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms