RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 B3GALT2O43825 422 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 GUCY1B2O75343 617 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 CIB2O75838 187 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 NELFEP18615 380 aaKnown RBP17.61■□□□□ 0.41
CLN3-206ENST00000360019 TCN1P20061 433 aaPredicted RBP17.61■□□□□ 0.41
CLN3-206ENST00000360019 ZNF10P21506 573 aaPredicted RBP17.61■□□□□ 0.41
CLN3-206ENST00000360019 ME2P23368 584 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 ARL4DP49703 201 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 DUSP3P51452 185 aaPredicted RBP17.61■□□□□ 0.41
CLN3-206ENST00000360019 LIM2P55344 173 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 RUNDC3AQ59EK9 446 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 C1orf146Q5VVC0 180 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 CYB5D1Q6P9G0 228 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 NET1Q7Z628 596 aaPredicted RBP17.61■□□□□ 0.41
CLN3-206ENST00000360019 ARPINQ7Z6K5 226 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 OR4D9Q8NGE8 314 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 OR8J3Q8NGG0 315 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 EXOSC8Q96B26 276 aaKnown RBP17.61■□□□□ 0.41
CLN3-206ENST00000360019 CNDP2Q96KP4 475 aaKnown RBP17.61■□□□□ 0.41
CLN3-206ENST00000360019 SPRTNQ9H040 489 aaPredicted RBP17.61■□□□□ 0.41
CLN3-206ENST00000360019 SYNDIG1Q9H7V2 258 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 TAS2R7Q9NYW3 318 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 EHD3Q9NZN3 535 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 PDP2Q9P2J9 529 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.61■□□□□ 0.41
CLN3-206ENST00000360019 DAPP1Q9UN19 280 aa17.61■□□□□ 0.41
CLN3-206ENST00000360019 FITM1A5D6W6 292 aa17.6■□□□□ 0.41
CLN3-206ENST00000360019 PGRMC2O15173 223 aa17.6■□□□□ 0.41
CLN3-206ENST00000360019 FLRT2O43155 660 aa17.6■□□□□ 0.41
CLN3-206ENST00000360019 ANP32DO95626 131 aa17.6■□□□□ 0.41
CLN3-206ENST00000360019 C6orf47O95873 294 aa17.6■□□□□ 0.41
CLN3-206ENST00000360019 C1QCP02747 245 aa17.6■□□□□ 0.41
CLN3-206ENST00000360019 FOLR1P15328 257 aa17.6■□□□□ 0.41
CLN3-206ENST00000360019 GPR19Q15760 415 aa17.6■□□□□ 0.41
CLN3-206ENST00000360019 INAVAQ3KP66 663 aa17.6■□□□□ 0.41
CLN3-206ENST00000360019 TCTE1Q5JU00 501 aa17.6■□□□□ 0.41
CLN3-206ENST00000360019 OR9A4Q8NGU2 314 aa17.6■□□□□ 0.41
CLN3-206ENST00000360019 N4BP2L2Q92802 583 aaPredicted RBP17.6■□□□□ 0.41
CLN3-206ENST00000360019 GBP5Q96PP8 586 aa17.6■□□□□ 0.41
CLN3-206ENST00000360019 L3MBTL1Q9Y468 752 aa17.6■□□□□ 0.41
CLN3-206ENST00000360019 ADAMTS20P59510 1910 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 IGHV5-10-1A0A0J9YXX1 117 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 C1orf226A1L170 272 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 SGK494L7N484 410 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 CKMT2P17540 419 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 PCBP4P57723 403 aaKnown RBP17.59■□□□□ 0.41
CLN3-206ENST00000360019 HBA1P69905 142 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 MS4A2Q01362 244 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 TNFRSF17Q02223 184 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 LRRC74AQ0VAA2 488 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 GAB1Q13480 694 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 ARHGAP22Q7Z5H3 698 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 OR5T3Q8NGG3 340 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 OR4A15Q8NGL6 344 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 RHBDD1Q8TEB9 315 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 CSF3RQ99062 836 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 CPPED1Q9BRF8 314 aaPredicted RBP17.59■□□□□ 0.41
CLN3-206ENST00000360019 ENAMQ9NRM1 1142 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 IRAK4Q9NWZ3 460 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 UTS2RQ9UKP6 389 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 CES1P1Q9UKY3 287 aa17.59■□□□□ 0.41
CLN3-206ENST00000360019 A0A1W2PRB8 838 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 HYKKA2RU49 373 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 TMEM150CB9EJG8 249 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 PDPK1O15530 556 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 FOXS1O43638 330 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 MGRN1O60291 552 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 ENTPD5O75356 428 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 LDOC1O95751 146 aaPredicted RBP17.58■□□□□ 0.41
CLN3-206ENST00000360019 ANKRD34CP0C6C1 535 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 MSL3P1P0C860 447 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 NR2F6P10588 404 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 CD59P13987 128 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 FRKP42685 505 aaPredicted RBP17.58■□□□□ 0.41
CLN3-206ENST00000360019 SPEM2Q0P670 501 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 SLC48A1Q6P1K1 146 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 ZNF621Q6ZSS3 439 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 RCBTB1Q8NDN9 531 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 GOT1L1Q8NHS2 421 aaPredicted RBP17.58■□□□□ 0.41
CLN3-206ENST00000360019 PHF12Q96QT6 1004 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 ALG2Q9H553 416 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 ANKHQ9HCJ1 492 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 LYRM4Q9HD34 91 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 SUCOQ9UBS9 1254 aaKnown RBP17.58■□□□□ 0.41
CLN3-206ENST00000360019 PHF11Q9UIL8 331 aa17.58■□□□□ 0.41
CLN3-206ENST00000360019 A0A0A6YYC8 382 aaPredicted RBP17.58■□□□□ 0.4
CLN3-206ENST00000360019 I3L1I5 382 aaPredicted RBP17.58■□□□□ 0.4
CLN3-206ENST00000360019 RDH16O75452 317 aa17.58■□□□□ 0.4
CLN3-206ENST00000360019 ABCB1P08183 1280 aaPredicted RBP17.58■□□□□ 0.4
CLN3-206ENST00000360019 HSD17B1P14061 328 aa17.58■□□□□ 0.4
CLN3-206ENST00000360019 CPN2P22792 545 aa17.58■□□□□ 0.4
CLN3-206ENST00000360019 GSK3BP49841 420 aa17.58■□□□□ 0.4
CLN3-206ENST00000360019 ACTR3P61158 418 aa17.58■□□□□ 0.4
CLN3-206ENST00000360019 LIPEQ05469 1076 aa17.58■□□□□ 0.4
CLN3-206ENST00000360019 SLC14A1Q13336 389 aa17.58■□□□□ 0.4
CLN3-206ENST00000360019 FAM53BQ14153 422 aa17.58■□□□□ 0.4
CLN3-206ENST00000360019 TMTC4Q5T4D3 741 aa17.58■□□□□ 0.4
CLN3-206ENST00000360019 GARNL3Q5VVW2 1013 aa17.58■□□□□ 0.4
CLN3-206ENST00000360019 CA13Q8N1Q1 262 aa17.58■□□□□ 0.4
CLN3-206ENST00000360019 NATD1Q8N6N6 113 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms