RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 LEFTY1O75610 366 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 APOL3O95236 402 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 HNF1BP35680 557 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 FXYD6P3P58550 94 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 KCNC4Q03721 635 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 GINS1Q14691 196 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF805Q5CZA5 627 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 GATSQ8NAP1 163 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 KCNN1Q92952 543 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 C1orf74Q96LT6 269 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 FAM83CQ9BQN1 747 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 TMEM121BQ9BXQ6 578 aaPredicted RBP11.11□□□□□ -0.63
LAMA4-201ENST00000230538 POLE4Q9NR33 117 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 SRRDQ9UH36 339 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 A8MV72 311 aaPredicted RBP11.11□□□□□ -0.63
LAMA4-201ENST00000230538 I3L521 148 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 SLITRK5O94991 958 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 GNAO1P09471 354 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 ACRV1P26436 265 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 GATMP50440 423 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 PTGR1Q14914 329 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.11□□□□□ -0.63
LAMA4-201ENST00000230538 OR5P2Q8WZ92 322 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 TCEAL3Q969E4 200 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 CREB3L1Q96BA8 519 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 FBRSL1Q9HCM7 1045 aaKnown RBP11.11□□□□□ -0.63
LAMA4-201ENST00000230538 PTBP2Q9UKA9 531 aaKnown RBP11.11□□□□□ -0.63
LAMA4-201ENST00000230538 PADI2Q9Y2J8 665 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 RICTORQ6R327 1708 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 AKAP12Q02952 1782 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 KNDC1Q76NI1 1749 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 UNC119BA6NIH7 251 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 NPIPA2E9PIF3 369 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 NPIPA3F8WFD2 350 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 COCHO43405 550 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 S1PR1P21453 382 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 ITPRIPL2Q3MIP1 535 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 NANOGP8Q6NSW7 305 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 C3orf33Q6P1S2 294 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 SHQ1Q6PI26 577 aaKnown RBP11.11□□□□□ -0.63
LAMA4-201ENST00000230538 IRF7Q92985 503 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 XKR8Q9H6D3 395 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 NANOGQ9H9S0 305 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 A0A096LPI6 279 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 HTRA2O43464 458 aaPredicted RBP11.11□□□□□ -0.63
LAMA4-201ENST00000230538 CDC123O75794 336 aaPredicted RBP11.11□□□□□ -0.63
LAMA4-201ENST00000230538 ETV3P41162 512 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 SOX2P48431 317 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 RPA4Q13156 261 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 NKAPLQ5M9Q1 402 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 GALNT12Q8IXK2 581 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 KRTCAP2Q8N6L1 136 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 OR8J3Q8NGG0 315 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 CNIH3Q8TBE1 160 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 TMEM234Q8WY98 164 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 OR10A4Q9H209 315 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 SMCO3A2RU48 225 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF860A6NHJ4 632 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 M0R129 80 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 DFNA5O60443 496 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 ENTPD1P49961 510 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 ARSFP54793 590 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 PLP2Q04941 152 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 PIGFQ07326 219 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 ELOCQ15369 112 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 ATP6AP1Q15904 470 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 ASPGQ86U10 573 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF709Q8N972 641 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.11□□□□□ -0.63
LAMA4-201ENST00000230538 RDH8Q9NYR8 311 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 ERVK-18Q9QC07 812 aa11.11□□□□□ -0.63
LAMA4-201ENST00000230538 FAAHO00519 579 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 PLD2O14939 933 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 H2BFMP0C1H6 154 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 CD9P21926 228 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 ADH7P40394 386 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 RPS21P63220 83 aaKnown RBP11.1□□□□□ -0.63
LAMA4-201ENST00000230538 TRAM1Q15629 374 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 CHRFAM7AQ494W8 412 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 ATG9BQ674R7 924 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 ERN2Q76MJ5 926 aaKnown RBP11.1□□□□□ -0.63
LAMA4-201ENST00000230538 NUP43Q8NFH3 380 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 CD300LFQ8TDQ1 290 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 THAP4Q8WY91 577 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 MR1Q95460 341 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 ZDHHC12Q96GR4 267 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 SIGLEC10Q96LC7 697 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 HSPA12BQ96MM6 686 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF285Q96NJ3 590 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 SLC16A5O15375 505 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 FARS2O95363 451 aaKnown RBP11.1□□□□□ -0.63
LAMA4-201ENST00000230538 KLF8O95600 359 aaPredicted RBP11.1□□□□□ -0.63
LAMA4-201ENST00000230538 DLDP09622 509 aaKnown RBP11.1□□□□□ -0.63
LAMA4-201ENST00000230538 JMJD7P0C870 316 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF783Q6ZMS7 281 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 Q6ZVL8 140 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 ISOC1Q96CN7 298 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 MOCOSQ96EN8 888 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 TIGARQ9NQ88 270 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 TMEM9Q9P0T7 183 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms