RNA–Protein interactions for RNA: ENST00000216027.7

HSCB-201, Transcript of HscB mitochondrial iron-sulfur cluster cochaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSCB, Length 1,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSCB-201ENST00000216027 LRFN1Q9P244 771 aa17.71■□□□□ 0.43
HSCB-201ENST00000216027 NFU1Q9UMS0 254 aa17.71■□□□□ 0.43
HSCB-201ENST00000216027 PCDHGA11Q9Y5H2 935 aa17.71■□□□□ 0.43
HSCB-201ENST00000216027 TRBV11-1A0A0K0K1C0 115 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 ASPDHA6ND91 283 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 POC1B-GALNT4F8VUJ3 575 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 SH3BGRLO75368 114 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 SP1P08047 785 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 ABHD2P08910 425 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 RBP1P09455 135 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 COL6A2P12110 1019 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 CD46P15529 392 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 SSR2P43308 183 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 PIK3CGP48736 1102 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 KCNK10P57789 538 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 OC90Q02509 493 aaPredicted RBP17.7■□□□□ 0.42
HSCB-201ENST00000216027 SRSF11Q05519 484 aaKnown RBP17.7■□□□□ 0.42
HSCB-201ENST00000216027 ELAVL1Q15717 326 aaKnown RBP17.7■□□□□ 0.42
HSCB-201ENST00000216027 TSNAXIP1Q2TAA8 658 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 AP5B1Q2VPB7 878 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 PTGR2Q8N8N7 351 aaPredicted RBP17.7■□□□□ 0.42
HSCB-201ENST00000216027 TMEM178AQ8NBL3 297 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 UHMK1Q8TAS1 419 aaKnown RBP17.7■□□□□ 0.42
HSCB-201ENST00000216027 NCLNQ969V3 563 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 IPPKQ9H8X2 491 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 ACTR8Q9H981 624 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 XPR1Q9UBH6 696 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 VTI1BQ9UEU0 232 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 TMCO1Q9UM00 188 aa17.7■□□□□ 0.42
HSCB-201ENST00000216027 DCHS2Q6V1P9 2916 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 CACNA1DQ01668 2161 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 TRIM49D1C9J1S8 452 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 SAP18O00422 153 aaKnown RBP17.69■□□□□ 0.42
HSCB-201ENST00000216027 PLPP1O14494 284 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 LRRTM2O43300 516 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 GCAP28676 217 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 EEF1DP29692 281 aaKnown RBP17.69■□□□□ 0.42
HSCB-201ENST00000216027 HLCSP50747 726 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 ARFIP1P53367 373 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 DDX39BQ13838 428 aaKnown RBP17.69■□□□□ 0.42
HSCB-201ENST00000216027 OR4C11Q6IEV9 310 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 SLC25A25Q6KCM7 469 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 GFRALQ6UXV0 394 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 MYLK4Q86YV6 388 aaPredicted RBP17.69■□□□□ 0.42
HSCB-201ENST00000216027 TMEM132CQ8N3T6 1108 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 WDR20Q8TBZ3 569 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 RGMAQ96B86 450 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 FRMD6Q96NE9 622 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 MTERF1Q99551 399 aaKnown RBP17.69■□□□□ 0.42
HSCB-201ENST00000216027 SORBS1Q9BX66 1292 aaKnown RBP17.69■□□□□ 0.42
HSCB-201ENST00000216027 ZNF717Q9BY31 904 aaPredicted RBP17.69■□□□□ 0.42
HSCB-201ENST00000216027 ALOXE3Q9BYJ1 711 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 RNF11Q9Y3C5 154 aa17.69■□□□□ 0.42
HSCB-201ENST00000216027 STX16-NPEPL1H3BU86 382 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 FCHO1O14526 889 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 OR7A17O14581 309 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 STX16O14662 325 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 PRKNO60260 465 aaPredicted RBP17.68■□□□□ 0.42
HSCB-201ENST00000216027 NME2P1O60361 137 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 LDB3O75112 727 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 SLC25A12O75746 678 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 WISP2O76076 250 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 CLDN1O95832 211 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 NME2P22392 152 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 CYB561P49447 251 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 RPS13P62277 151 aaKnown RBP17.68■□□□□ 0.42
HSCB-201ENST00000216027 IGLV3-21P80748 117 aaPredicted RBP17.68■□□□□ 0.42
HSCB-201ENST00000216027 SERTAD2Q14140 314 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 HIST2H2BCQ6DN03 193 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 GALNTL5Q7Z4T8 443 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 IFT20Q8IY31 132 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 ZCCHC7Q8N3Z6 543 aaKnown RBP17.68■□□□□ 0.42
HSCB-201ENST00000216027 PTPMT1Q8WUK0 201 aaPredicted RBP17.68■□□□□ 0.42
HSCB-201ENST00000216027 ANKRD9Q96BM1 317 aaPredicted RBP17.68■□□□□ 0.42
HSCB-201ENST00000216027 REPS1Q96D71 796 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 PHF21BQ96EK2 531 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 PSD3Q9NYI0 1048 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 SEC14L3Q9UDX4 400 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 PCTPQ9UKL6 214 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 PPT2Q9UMR5 302 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 SPACA6W5XKT8 324 aa17.68■□□□□ 0.42
HSCB-201ENST00000216027 DNAJC13O75165 2243 aa17.67■□□□□ 0.42
HSCB-201ENST00000216027 ZNF407Q9C0G0 2248 aa17.67■□□□□ 0.42
HSCB-201ENST00000216027 NCOA6Q14686 2063 aaPredicted RBP17.67■□□□□ 0.42
HSCB-201ENST00000216027 EXOC1LA0A1B0GW35 172 aa17.67■□□□□ 0.42
HSCB-201ENST00000216027 A1L4Q6 167 aa17.67■□□□□ 0.42
HSCB-201ENST00000216027 TMEM200CA6NKL6 621 aa17.67■□□□□ 0.42
HSCB-201ENST00000216027 FOXE1O00358 373 aaPredicted RBP17.67■□□□□ 0.42
HSCB-201ENST00000216027 UNC5CO95185 931 aa17.67■□□□□ 0.42
HSCB-201ENST00000216027 SNRPAP09012 282 aaKnown RBP17.67■□□□□ 0.42
HSCB-201ENST00000216027 CPN2P22792 545 aa17.67■□□□□ 0.42
HSCB-201ENST00000216027 PTX3P26022 381 aaPredicted RBP17.67■□□□□ 0.42
HSCB-201ENST00000216027 RAP1GDS1P52306 607 aa17.67■□□□□ 0.42
HSCB-201ENST00000216027 STX4Q12846 297 aa17.67■□□□□ 0.42
HSCB-201ENST00000216027 SLAMF1Q13291 335 aa17.67■□□□□ 0.42
HSCB-201ENST00000216027 CUL3Q13618 768 aa17.67■□□□□ 0.42
HSCB-201ENST00000216027 CPSF6Q16630 551 aaKnown RBP eCLIP17.67■□□□□ 0.42
HSCB-201ENST00000216027 TRMT10CQ7L0Y3 403 aaKnown RBP17.67■□□□□ 0.42
HSCB-201ENST00000216027 MAMDC2Q7Z304 686 aaPredicted RBP17.67■□□□□ 0.42
HSCB-201ENST00000216027 TMEM151AQ8N4L1 468 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms