RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 FAM234BA2RU67 622 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 TLR4O00206 839 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 ZNF718Q3SXZ3 478 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 FLYWCH1Q4VC44 716 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 PRRT2Q7Z6L0 340 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 LINC00471Q8N535 108 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 BBS10Q8TAM1 723 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 SEC14L1Q92503 715 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 SHDQ96IW2 340 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 TMEM51Q9NW97 253 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 HRASLS2Q9NWW9 162 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 ILVBLA1L0T0 632 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 ZNF705FA8MVS1 300 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 HMGB3O15347 200 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 ZNF705DP0CH99 300 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 ZNF705BP0CI00 300 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 VMACQ2NL98 169 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 CCDC107Q8WV48 283 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 C3orf49Q96BT1 292 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 MEIS3P2A8K0S8 358 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 CDH1P12830 882 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 S100PP25815 95 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 RPL5P46777 297 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 EPHA4P54764 986 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 DSTNP60981 165 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 DYRK1AQ13627 763 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 SLC9B2Q86UD5 537 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 FBXL18Q96ME1 805 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 ROBO1Q9Y6N7 1651 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 DOK2O60496 412 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 VNN1O95497 513 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 CD36P16671 472 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 C1orf52Q8N6N3 182 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 OR56B2PQ8NGI1 322 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 P2RX2Q9UBL9 471 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 PCDHGA2Q9Y5H1 932 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 GON4LQ3T8J9 2241 aa16.39■□□□□ 0.21
CACNA1A-253ENST00000637927 DNAJA2O60884 412 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 CRHBPP24387 322 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 MAOBP27338 520 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 ACVR1BP36896 505 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 EOGTQ5NDL2 527 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 SLC36A4Q6YBV0 504 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 C4orf32Q8N8J7 132 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 PTBP2Q9UKA9 531 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 CDC14AQ9UNH5 594 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 MYO5BQ9ULV0 1848 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 XPNPEP2O43895 674 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 C6orf47O95873 294 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 CPOXP36551 454 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 FAM205BPQ63HN1 556 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 LBX2Q6XYB7 198 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 PTCHD1Q96NR3 888 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 SALL4Q9UJQ4 1053 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 EEF1E1-BLOC1S5C9J1V9 151 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 TULP2O00295 520 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 EEF1E1O43324 174 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 IL1AP01583 271 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 TYRP14679 529 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 EEF1A1P5Q5VTE0 462 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 TMEM198Q66K66 360 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 LRRN1Q6UXK5 716 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 CLEC20AQ6ZU45 233 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 FBXL16Q8N461 479 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 LMF1Q96S06 567 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 EBF4Q9BQW3 602 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 CAMK2AQ9UQM7 478 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 IMPA2O14732 288 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 ECI2O75521 394 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 TGDSO95455 350 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 AQP4P55087 323 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 EEFSECP57772 596 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 ANKDD1AQ495B1 522 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 FUBP3Q96I24 572 aaKnown RBP eCLIP16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 AJAP1Q9UKB5 411 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 BMP8BP34820 402 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 AKR1C2P52895 323 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 EEF1A2Q05639 463 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 BMP8AQ7Z5Y6 402 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 MEX3DQ86XN8 651 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 IL1F10Q8WWZ1 152 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 DPCDQ9BVM2 203 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 PTGES2Q9H7Z7 377 aa16.38■□□□□ 0.21
CACNA1A-253ENST00000637927 L1CAMP32004 1257 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 SOX3P41225 446 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 IQCCQ4KMZ1 466 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 DTLQ9NZJ0 730 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 KCMF1Q9P0J7 381 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 PCDHGC3Q9UN70 934 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 TLR6Q9Y2C9 796 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 YIPF1Q9Y548 306 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 C2CD4BA6NLJ0 364 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 RHOP08100 348 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 ATP1B2P14415 290 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 OXTRP30559 389 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 CRISP1P54107 249 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 SLC44A3Q8N4M1 653 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 ZNF431Q8TF32 576 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 HSPA12BQ96MM6 686 aa16.37■□□□□ 0.21
CACNA1A-253ENST00000637927 CCM2Q9BSQ5 444 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms