RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 TESCQ96BS2 214 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 ITCHQ96J02 903 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 NRTNQ99748 197 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 GDF15Q99988 308 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 TRMT61BQ9BVS5 477 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 NXF2Q9GZY0 626 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 KCNH6Q9H252 994 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 ADPRHL2Q9NX46 363 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 DNAJB9Q9UBS3 223 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 KIAA1549LQ6ZVL6 1849 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 C17orf113A0A1B0GUU1 675 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 PRKD3O94806 890 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 ANXA6P08133 673 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 MTHFRP42898 656 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 KIR3DL1P43629 444 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 CXCR4P61073 352 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 CDK3Q00526 305 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 TAP2Q03519 686 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 CHRNB3Q05901 458 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 YIF1BQ5BJH7 314 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 ZC3H12BQ5HYM0 836 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 AMZ2Q86W34 360 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 OR5AR1Q8NGP9 310 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 ST6GAL2Q96JF0 529 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 ZDHHC5Q9C0B5 715 aa16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 REXO4Q9GZR2 422 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 MBNL1Q9NR56 388 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-205ENST00000594973 F5P12259 2224 aa16.33■□□□□ 0.21
SHKBP1-205ENST00000594973 TRBV5-3A0A0A0MS03 114 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 ELOVL7A1L3X0 281 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 EFCAB9A8MZ26 197 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 NPIPB8E9PQR5 432 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 RFXANKO14593 260 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 POLR1CO15160 346 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 ERN1O75460 977 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 EFNA1P20827 205 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 PRPS1L1P21108 318 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 ACADLP28330 430 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 CD6P30203 668 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 RPS13P62277 151 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 SLBPQ14493 270 aaKnown RBP eCLIP16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 RFX4Q33E94 735 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 ADAMTSL4Q6UY14 1074 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 IDO2Q6ZQW0 420 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 NUDT18Q6ZVK8 323 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 SLC51BQ86UW2 128 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 KLHDC8AQ8IYD2 350 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 TMEM132CQ8N3T6 1108 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 FAM86B1Q8N7N1 296 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 CELF2-AS1Q8N7Q2 184 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 FBXO15Q8NCQ5 510 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 FBXO30Q8TB52 745 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 COX14Q96I36 57 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 RSPH9Q9H1X1 276 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 DCSTAMPQ9H295 470 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 DPEP2Q9H4A9 486 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 FKBP14Q9NWM8 211 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 FBXL12Q9NXK8 326 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 DYRK1BQ9Y463 629 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 MAGED1Q9Y5V3 778 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 TRPM6Q9BX84 2022 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 A0A096LPI6 279 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 CDK2AP1O14519 115 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 PAK4O96013 591 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 C1QCP02747 245 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 COX7A2P14406 83 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 SLC35A2P78381 396 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 DLX2Q07687 328 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 UGT8Q16880 541 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 C2orf27AQ580R0 203 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 CCNJQ5T5M9 372 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 CES5AQ6NT32 575 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 MED27Q6P2C8 311 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 VN1R5Q7Z5H4 357 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 NATD1Q8N6N6 113 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 GANCQ8TET4 914 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 NCLNQ969V3 563 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 ELSPBP1Q96BH3 223 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 ACAT2Q9BWD1 397 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 OR52A5Q9H2C5 316 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 SMURF2Q9HAU4 748 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 GIMAP4Q9NUV9 329 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 ERVK-18Q9QC07 812 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 LIMD1Q9UGP4 676 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 ADGRE2Q9UHX3 823 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 MKLN1Q9UL63 735 aa16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 RUVBL1Q9Y265 456 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-205ENST00000594973 SAP18O00422 153 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-205ENST00000594973 ANGPTL1O95841 491 aa16.32■□□□□ 0.2
SHKBP1-205ENST00000594973 MYCLP1P12525 358 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-205ENST00000594973 PSMB9P28065 219 aa16.32■□□□□ 0.2
SHKBP1-205ENST00000594973 PNLIPRP1P54315 467 aa16.32■□□□□ 0.2
SHKBP1-205ENST00000594973 TMEM184AQ6ZMB5 413 aa16.32■□□□□ 0.2
SHKBP1-205ENST00000594973 PARP16Q8N5Y8 322 aa16.32■□□□□ 0.2
SHKBP1-205ENST00000594973 PSD4Q8NDX1 1056 aa16.32■□□□□ 0.2
SHKBP1-205ENST00000594973 SETD9Q8NE22 299 aa16.32■□□□□ 0.2
SHKBP1-205ENST00000594973 FAM120BQ96EK7 910 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-205ENST00000594973 PANX1Q96RD7 426 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms