RNA–Protein interactions for RNA: ENST00000516584.1

RNU6-1004P-201, Transcript of RNA, U6 small nuclear 1004, pseudogene, humanhuman

BASIC

Gene RNU6-1004P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1004P-201ENST00000516584 FOXJ3Q9UPW0 622 aa4.45□□□□□ -1.7
RNU6-1004P-201ENST00000516584 SATB2Q9UPW6 733 aa4.45□□□□□ -1.7
RNU6-1004P-201ENST00000516584 MRPS7Q9Y2R9 242 aaKnown RBP4.45□□□□□ -1.7
RNU6-1004P-201ENST00000516584 COX11Q9Y6N1 276 aa4.45□□□□□ -1.7
RNU6-1004P-201ENST00000516584 CGNL1Q0VF96 1302 aa4.45□□□□□ -1.7
RNU6-1004P-201ENST00000516584 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 MTMR11A4FU01 709 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 SNURFLB1AK76 121 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 PDXKO00764 312 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 KRT86O43790 486 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ECE2O60344 883 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 RHOBTB1O94844 696 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 KIAA0754O94854 1291 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 MFN2O95140 757 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 TXNDC12O95881 172 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 HIST1H2AGP0C0S8 130 aaPredicted RBP4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ACKR3P25106 362 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 LIMK2P53671 638 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 KRT81Q14533 505 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 TMEM132DQ14C87 1099 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 TAF13Q15543 124 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 TRIP10Q15642 601 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 EXT1Q16394 746 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 CCDC57Q2TAC2 916 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 MPPE1Q53F39 396 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ZYG11AQ6WRX3 759 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 CYP4V2Q6ZWL3 525 aaPredicted RBP4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ANO5Q75V66 913 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 TRMT11Q7Z4G4 463 aaKnown RBP4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 STEAP2Q8NFT2 490 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 OR56B2PQ8NGI1 322 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 GPR148Q8TDV2 347 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 HIST1H2ACQ93077 130 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 AZIN2Q96A70 460 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ZNF274Q96GC6 653 aaPredicted RBP4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ADGRG7Q96K78 797 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 S1PR3Q99500 378 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 CCT7Q99832 543 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 MRPL13Q9BYD1 178 aaKnown RBP4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 IL25Q9H293 177 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 VCX2Q9H322 139 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 EGLN3Q9H6Z9 239 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 UPF2Q9HAU5 1272 aaKnown RBP4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 TM9SF3Q9HD45 589 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 TBC1D13Q9NVG8 400 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ZNF319Q9P2F9 582 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ERVK-18Q9QC07 812 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 C19orf25Q9UFG5 118 aaPredicted RBP4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 BCAP29Q9UHQ4 241 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 PTBP2Q9UKA9 531 aaKnown RBP4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 PILRBQ9UKJ0 227 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 POMT2Q9UKY4 750 aa4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 DIMT1Q9UNQ2 313 aaKnown RBP4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 DDX49Q9Y6V7 483 aaKnown RBP4.44□□□□□ -1.7
RNU6-1004P-201ENST00000516584 RAD54L2Q9Y4B4 1467 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 A8MUI8 341 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 B4GAT1O43505 415 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 NR3C1P04150 777 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 APRTP07741 180 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 SFTPCP11686 197 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ACADSBP45954 432 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 C21orf58P58505 322 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 TUBA1BP68363 451 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 CCNA1P78396 465 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ZXDAP98168 799 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 MYL7Q01449 175 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 CUL2Q13617 745 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 KLF9Q13886 244 aaPredicted RBP4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ANKRD55Q3KP44 614 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 LCN1P1Q5VSP4 162 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ASPHD2Q6ICH7 369 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 CDC42EP5Q6NZY7 148 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 LRRC70Q7Z2Q7 622 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ZNF843Q8N446 348 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ZNF383Q8NA42 475 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ADAD2Q8NCV1 583 aaKnown RBP4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 OR13C2Q8NGS9 318 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 GIPC3Q8TF64 312 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 IGSF21Q96ID5 467 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 TCEANC2Q96MN5 208 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ZNF48Q96MX3 618 aaPredicted RBP4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 PSKH2Q96QS6 385 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 SECISBP2Q96T21 854 aaKnown RBP4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ZBTB18Q99592 522 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 RHNO1Q9BSD3 238 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 GCOM2Q9BZD3 368 aaPredicted RBP4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 CPVLQ9H3G5 476 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 FKRPQ9H9S5 495 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ECHDC1Q9NTX5 307 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 RBM28Q9NW13 759 aaKnown RBP4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 POLKQ9UBT6 870 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 DBF4Q9UBU7 674 aaPredicted RBP4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 SF3B1O75533 1304 aaKnown RBP eCLIP4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 ZMYM6O95789 1325 aa4.43□□□□□ -1.7
RNU6-1004P-201ENST00000516584 IGLV5-45A0A087WSX0 123 aa4.42□□□□□ -1.7
RNU6-1004P-201ENST00000516584 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.42□□□□□ -1.7
RNU6-1004P-201ENST00000516584 IGLV9-49A0A0B4J1Y8 123 aa4.42□□□□□ -1.7
RNU6-1004P-201ENST00000516584 SH3PXD2BA1X283 911 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms