RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 ZSCAN5BA6NJL1 495 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 PDXKO00764 312 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 OR4F21O95013 312 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 PMS2P2O95744 297 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 ATP1B1P05026 303 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 YES1P07947 543 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 SERPINF2P08697 491 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 IQCF3P0C7M6 154 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 CDH1P12830 882 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 HLA-DOBP13765 273 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 HOXB2P14652 356 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 ZNF23P17027 643 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 CA4P22748 312 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 CCNCP24863 283 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 PTPN4P29074 926 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 RBMS1P29558 406 aaKnown RBP4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 CLCN4P51793 760 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 TNFRSF17Q02223 184 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 SP3Q02447 781 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 RBM39Q14498 530 aaKnown RBP4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 RABGAP1LQ5R372 815 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 LIPJQ5W064 366 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 SLC27A4Q6P1M0 643 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 DHRS11Q6UWP2 260 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 TRMT1LQ7Z2T5 733 aaKnown RBP4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 RCOR2Q8IZ40 523 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 SLC43A2Q8N370 569 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 TMEM99Q8N816 258 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 PRR26Q8N8Z3 221 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 KCNH5Q8NCM2 988 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 OR2T12Q8NG77 320 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 OR6M1Q8NGM8 313 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 OR13C5Q8NGS8 318 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 CHPT1Q8WUD6 406 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 PIK3R3Q92569 461 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 FBXO32Q969P5 355 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 TMEM45BQ96B21 275 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 NEDD4LQ96PU5 975 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 PSKH2Q96QS6 385 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 SECISBP2Q96T21 854 aaKnown RBP4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 KRT12Q99456 494 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 AGPAT1Q99943 283 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 ALG12Q9BV10 488 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 SF3B5Q9BWJ5 86 aaKnown RBP4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 TBC1D10AQ9BXI6 508 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 GSDMCQ9BYG8 508 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 ZNF665Q9H7R5 613 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 HIF1ANQ9NWT6 349 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 C19orf25Q9UFG5 118 aaPredicted RBP4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 BAIAP2L1Q9UHR4 511 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 FOXJ3Q9UPW0 622 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 TMED5Q9Y3A6 229 aa4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 SF3B1O75533 1304 aaKnown RBP eCLIP4.94□□□□□ -1.62
SOX2-OT-216ENST00000497122 NPC1L1Q9UHC9 1359 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 LOC101059948A0A1B0GTJ6 334 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 GSAPA4D1B5 854 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 A8MVM7 634 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 H0YC42 278 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 CHEK1O14757 476 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 MLNRO43193 412 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 ERLIN1O75477 346 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 MT-ND2P03891 347 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 PRSS2P07478 247 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 HIST1H2AGP0C0S8 130 aaPredicted RBP4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 CD59P13987 128 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 OTX2P32243 289 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 TNNT2P45379 298 aaPredicted RBP4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 ACADSBP45954 432 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 KCNJ4P48050 445 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 DNA2P51530 1060 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 NAPAP54920 295 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 PITX1P78337 314 aaPredicted RBP4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 GBE1Q04446 702 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 FUT7Q11130 342 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 TMEM132DQ14C87 1099 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 EXOSC7Q15024 291 aaKnown RBP4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 LRRC37A5PQ49AS3 106 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 XKR3Q5GH77 459 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 SPATA46Q5T0L3 261 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 MORN5Q5VZ52 161 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 ZNF776Q68DI1 518 aaPredicted RBP4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 ASPHD2Q6ICH7 369 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 CEACAM20Q6UY09 585 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 SLC24A5Q71RS6 500 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 PIP4P1Q86T03 277 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 STEAP2Q8NFT2 490 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 AKR7LQ8NHP1 331 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 GIPC3Q8TF64 312 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 ZNF473Q8WTR7 871 aaKnown RBP4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 ASB5Q8WWX0 329 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 HIST1H2ACQ93077 130 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 NCLNQ969V3 563 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 ZNF48Q96MX3 618 aaPredicted RBP4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 VPS35Q96QK1 796 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 OR2B2Q9GZK3 357 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 UBTD1Q9HAC8 227 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 SDR39U1Q9NRG7 319 aaPredicted RBP4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 EXOC1Q9NV70 894 aa4.93□□□□□ -1.62
SOX2-OT-216ENST00000497122 AIPL1Q9NZN9 384 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms