RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 TIAL1Q01085 375 aaKnown RBP eCLIP16.71■□□□□ 0.27
CHCHD3-203ENST00000448878 RBM20Q5T481 1227 aaKnown RBP16.71■□□□□ 0.27
CHCHD3-203ENST00000448878 HSDL2Q6YN16 418 aa16.71■□□□□ 0.27
CHCHD3-203ENST00000448878 RTL4Q6ZR62 310 aa16.71■□□□□ 0.27
CHCHD3-203ENST00000448878 CDC20BQ86Y33 519 aa16.71■□□□□ 0.27
CHCHD3-203ENST00000448878 TMEM132CQ8N3T6 1108 aa16.71■□□□□ 0.27
CHCHD3-203ENST00000448878 FAM47BQ8NA70 645 aa16.71■□□□□ 0.27
CHCHD3-203ENST00000448878 GABPB2Q8TAK5 448 aaPredicted RBP16.71■□□□□ 0.27
CHCHD3-203ENST00000448878 SARAFQ96BY9 339 aa16.71■□□□□ 0.27
CHCHD3-203ENST00000448878 FBXL8Q96CD0 374 aa16.71■□□□□ 0.27
CHCHD3-203ENST00000448878 SMIM10Q96HG1 83 aa16.71■□□□□ 0.27
CHCHD3-203ENST00000448878 IL1RL2Q9HB29 575 aa16.71■□□□□ 0.27
CHCHD3-203ENST00000448878 ADAP2Q9NPF8 381 aa16.71■□□□□ 0.27
CHCHD3-203ENST00000448878 MRPS33Q9Y291 106 aaKnown RBP16.71■□□□□ 0.27
CHCHD3-203ENST00000448878 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 C4orf51C9J302 202 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 FAM47E-STBD1D6RA91 191 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 AQP7O14520 342 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 IGHG3P01860 377 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 SERPINA6P08185 405 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 CELA3AP09093 270 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 FOSL1P15407 271 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 CXCR5P32302 372 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 MAGEA6P43360 314 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 GPR143P51810 404 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 PGGT1BP53609 377 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 HSD17B7P56937 341 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 ADAM8P78325 824 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 LTBQ06643 244 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 RUNX2Q13950 521 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 NXPE4Q6UWF7 544 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 THOC6Q86W42 341 aaKnown RBP16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 SCUBE1Q8IWY4 988 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 C2CD4AQ8NCU7 369 aaPredicted RBP16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 LRRC46Q96FV0 321 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 SCYL1Q96KG9 808 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 ALPK1Q96QP1 1244 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 PELI2Q9HAT8 420 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 PRM3Q9NNZ6 103 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 SACM1LQ9NTJ5 587 aa16.7■□□□□ 0.26
CHCHD3-203ENST00000448878 MAP1AP78559 2803 aaPredicted RBP16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 TGFBR3LH3BV60 316 aa16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 ERI3O43414 337 aaKnown RBP16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 B3GALT2O43825 422 aa16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 H2AFYO75367 372 aaKnown RBP16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 GLSO94925 669 aaPredicted RBP16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 HNRNPFP52597 415 aaKnown RBP16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 HK2P52789 917 aa16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 RAB38P57729 211 aa16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 TAOK1Q7L7X3 1001 aa16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 GPATCH11Q8N954 259 aa16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 TMEM52Q8NDY8 209 aa16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 MCUQ8NE86 351 aa16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 GAL3ST3Q96A11 431 aa16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 OR8D2Q9GZM6 311 aa16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 TUBA8Q9NY65 449 aaPredicted RBP16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 B4GALT7Q9UBV7 327 aa16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 PPIEQ9UNP9 301 aaKnown RBP16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 SLC22A14Q9Y267 594 aa16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 RPH3AQ9Y2J0 694 aaPredicted RBP16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 KCNE2Q9Y6J6 123 aa16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 ZNF407Q9C0G0 2248 aa16.69■□□□□ 0.26
CHCHD3-203ENST00000448878 A0A088AWK7 358 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 TRGV5A0A0B4J1U4 118 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 A0A1B0GVC2 190 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 A6NNC1 897 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 SUSD5O60279 629 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 GABRA1P14867 456 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 ZNF10P21506 573 aaPredicted RBP16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 ADSLP30566 484 aaPredicted RBP16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 PEX19P40855 299 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 PLA2G16P53816 162 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 STX4Q12846 297 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 KEAP1Q14145 624 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 ELAVL1Q15717 326 aaKnown RBP16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 CAMKMTQ7Z624 323 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 KLHDC8AQ8IYD2 350 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 AGGF1Q8N302 714 aaeCLIP16.68■□□□□ 0.263e-6■■■■□ 20.2
CHCHD3-203ENST00000448878 SPC24Q8NBT2 197 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 DAZLQ92904 295 aaKnown RBP16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 SIGLEC10Q96LC7 697 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 RUNDC3BQ96NL0 473 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 EGFL8Q99944 293 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 SMR3AQ99954 134 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 NPLQ9BXD5 320 aaPredicted RBP16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 AICDAQ9GZX7 198 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 PPANQ9NQ55 473 aaKnown RBP16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 DMRT3Q9NQL9 472 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 DLL4Q9NR61 685 aa16.68■□□□□ 0.26
CHCHD3-203ENST00000448878 AHSGP02765 367 aa16.67■□□□□ 0.26
CHCHD3-203ENST00000448878 BMP5P22003 454 aa16.67■□□□□ 0.26
CHCHD3-203ENST00000448878 PIGAP37287 484 aa16.67■□□□□ 0.26
CHCHD3-203ENST00000448878 FLYWCH1Q4VC44 716 aa16.67■□□□□ 0.26
CHCHD3-203ENST00000448878 RIPPLY2Q5TAB7 128 aa16.67■□□□□ 0.26
CHCHD3-203ENST00000448878 OPN5Q6U736 354 aa16.67■□□□□ 0.26
CHCHD3-203ENST00000448878 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.67■□□□□ 0.26
CHCHD3-203ENST00000448878 ZNF595Q8IYB9 648 aa16.67■□□□□ 0.26
CHCHD3-203ENST00000448878 ZNF321PQ8N8H1 164 aa16.67■□□□□ 0.26
CHCHD3-203ENST00000448878 MAGOHBQ96A72 148 aaKnown RBP16.67■□□□□ 0.26
CHCHD3-203ENST00000448878 ALOXE3Q9BYJ1 711 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms