RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 SAGE2PA6NJ88 616 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 A8MT66 165 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 A8MUI8 341 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 TGFBR3LH3BV60 316 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 SAP18O00422 153 aaKnown RBP19.03■□□□□ 0.64
GTF3A-202ENST00000419181 CLDN4O14493 209 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 CLDN9O95484 217 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 WDPCPO95876 746 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 RPS17P08708 135 aaKnown RBP19.03■□□□□ 0.64
GTF3A-202ENST00000419181 HIST1H1TP22492 207 aaPredicted RBP19.03■□□□□ 0.64
GTF3A-202ENST00000419181 UQCRFS1P47985 274 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 ZNF33BQ06732 778 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 RCN2Q14257 317 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 ACER2Q5QJU3 275 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 CYP4X1Q8N118 509 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 WDR20Q8TBZ3 569 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 ACMSDQ8TDX5 336 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 ELP5Q8TE02 316 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 MAGEB10Q96LZ2 347 aaPredicted RBP19.03■□□□□ 0.64
GTF3A-202ENST00000419181 CDK15Q96Q40 435 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 CCDC77Q9BR77 488 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 NTMT1Q9BV86 223 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 C1QTNF3Q9BXJ4 246 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 PRM3Q9NNZ6 103 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 STMN3Q9NZ72 180 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 TMEM216Q9P0N5 145 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 MAP10Q9P2G4 905 aa19.03■□□□□ 0.64
GTF3A-202ENST00000419181 USP9XQ93008 2570 aaPredicted RBP19.03■□□□□ 0.64
GTF3A-202ENST00000419181 TCP11X1B4DZS4 312 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 SHBGP04278 402 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 SSR2P43308 183 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 CCNG1P51959 295 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 ARFIP1P53367 373 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 TRAF3Q13114 568 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 TERF2Q15554 542 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 ZRSR2Q15696 482 aaKnown RBP19.02■□□□□ 0.64
GTF3A-202ENST00000419181 AP5B1Q2VPB7 878 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 FCRLBQ6BAA4 426 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 CRLF3Q8IUI8 442 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 NFAM1Q8NET5 270 aaPredicted RBP19.02■□□□□ 0.64
GTF3A-202ENST00000419181 OR1N1Q8NGS0 311 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 UBLCP1Q8WVY7 318 aaPredicted RBP19.02■□□□□ 0.64
GTF3A-202ENST00000419181 ATP6V1E2Q96A05 226 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 ZNF354BQ96LW1 612 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 NPAS2Q99743 824 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 MAPKAP1Q9BPZ7 522 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 SLC29A3Q9BZD2 475 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 TBK1Q9UHD2 729 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 COPG1Q9Y678 874 aaKnown RBP19.02■□□□□ 0.64
GTF3A-202ENST00000419181 PTPN13Q12923 2485 aa19.02■□□□□ 0.64
GTF3A-202ENST00000419181 ESPL1Q14674 2120 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 TRAV17A0A0B4J275 112 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 CLEC18AA5D8T8 446 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 OR5H15A6NDH6 313 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 PLPP1O14494 284 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 F10P00742 488 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 GNLYP22749 145 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 PTX3P26022 381 aaPredicted RBP19.01■□□□□ 0.63
GTF3A-202ENST00000419181 ARL1P40616 181 aaPredicted RBP19.01■□□□□ 0.63
GTF3A-202ENST00000419181 RPS13P62277 151 aaKnown RBP19.01■□□□□ 0.63
GTF3A-202ENST00000419181 PHEXP78562 749 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 SLC13A2Q13183 592 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 OR4C11Q6IEV9 310 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 RPUSD3Q6P087 351 aaKnown RBP19.01■□□□□ 0.63
GTF3A-202ENST00000419181 CLEC18BQ6UXF7 455 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 BEST3Q8N1M1 668 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 KIF2BQ8N4N8 673 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 SLC5A8Q8N695 610 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 CLEC18CQ8NCF0 446 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 ZNF483Q8TF39 744 aaPredicted RBP19.01■□□□□ 0.63
GTF3A-202ENST00000419181 RGMAQ96B86 450 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 CENPKQ9BS16 269 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 SORBS1Q9BX66 1292 aaKnown RBP19.01■□□□□ 0.63
GTF3A-202ENST00000419181 SEMA4BQ9NPR2 832 aaPredicted RBP19.01■□□□□ 0.63
GTF3A-202ENST00000419181 PSD3Q9NYI0 1048 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 PPT2Q9UMR5 302 aa19.01■□□□□ 0.63
GTF3A-202ENST00000419181 A8MUA0 341 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 GOLGA8RI6L899 631 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 FOXE1O00358 373 aaPredicted RBP19■□□□□ 0.63
GTF3A-202ENST00000419181 ZNF500O60304 480 aaPredicted RBP19■□□□□ 0.63
GTF3A-202ENST00000419181 MAN1A2O60476 641 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 CTNSO60931 367 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 ETHE1O95571 254 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 PYGBP11216 843 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 PPP2R1BP30154 601 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 NEK2P51955 445 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 RAP1GDS1P52306 607 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 TAS2R50P59544 299 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 CUL3Q13618 768 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 UBAP2LQ14157 1087 aaKnown RBP19■□□□□ 0.63
GTF3A-202ENST00000419181 MEP1AQ16819 746 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 GGTA1PQ4G0N0 100 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 RPS27LQ71UM5 84 aaKnown RBP19■□□□□ 0.63
GTF3A-202ENST00000419181 CLNKQ7Z7G1 428 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 LGI4Q8N135 537 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 ZNF717Q9BY31 904 aaPredicted RBP19■□□□□ 0.63
GTF3A-202ENST00000419181 PPCSQ9HAB8 311 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 PPIEQ9UNP9 301 aaKnown RBP19■□□□□ 0.63
GTF3A-202ENST00000419181 SPACA6W5XKT8 324 aa19■□□□□ 0.63
GTF3A-202ENST00000419181 A0A1B0GTL3 188 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms