RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 SLC28A2O43868 658 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 ERLIN1O75477 346 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 PROCP04070 461 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 PDGFAP04085 211 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 UQCRHP07919 91 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 PKNOX1P55347 436 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 OR4D2P58180 307 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 ASPHQ12797 758 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 RUNX2Q13950 521 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 SFT2D3Q587I9 215 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 ISLR2Q6UXK2 745 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 TRABD2AQ86V40 505 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 PTRH1Q86Y79 214 aaKnown RBP17.4■□□□□ 0.38
CHTOP-202ENST00000368687 CYP4X1Q8N118 509 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 CCDC63Q8NA47 563 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 OR4F6Q8NGB9 312 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 M1APQ8TC57 530 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 CDK15Q96Q40 435 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 BRF2Q9HAW0 419 aa17.4■□□□□ 0.38
CHTOP-202ENST00000368687 IGKV3D-11A0A0A0MRZ8 115 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 A0A0G2JN53 185 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 TCRBV16S1A1N1A0A5B0 115 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 PLIN3O60664 434 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 KRT6AP02538 564 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 KRT6BP04259 564 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 ENO1P06733 434 aaKnown RBP17.39■□□□□ 0.37
CHTOP-202ENST00000368687 HSD3B1P14060 373 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 NR1D1P20393 614 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 HSD3B2P26439 372 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 PPP2R1BP30154 601 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 TLX1P31314 330 aaPredicted RBP17.39■□□□□ 0.37
CHTOP-202ENST00000368687 KRT6CP48668 564 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 DNAJB13P59910 316 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 RPS13P62277 151 aaKnown RBP17.39■□□□□ 0.37
CHTOP-202ENST00000368687 Q0VFX4 171 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 SLC13A2Q13183 592 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 BIKQ13323 160 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 RAPSNQ13702 412 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 PAPD4Q6PIY7 484 aaKnown RBP17.39■□□□□ 0.37
CHTOP-202ENST00000368687 IGFL2Q6UWQ7 119 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 LANCL3Q6ZV70 420 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 GPRIN3Q6ZVF9 776 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 PAGE2Q7Z2X7 111 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 NUDT13Q86X67 352 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 SCUBE1Q8IWY4 988 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 OR2W6PQ8NHA6 318 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 PNPLA2Q96AD5 504 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 APOPT1Q96IL0 206 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 SMC6Q96SB8 1091 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 OR51B5Q9H339 312 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 PRTFDC1Q9NRG1 225 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 LYARQ9NX58 379 aaKnown RBP17.39■□□□□ 0.37
CHTOP-202ENST00000368687 ADAM29Q9UKF5 820 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 EMCNQ9ULC0 261 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 PLAAQ9Y263 795 aa17.39■□□□□ 0.37
CHTOP-202ENST00000368687 J3QKU1 62 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 K7EM74 188 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 CYR61O00622 381 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 PLPP1O14494 284 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 CDK2AP1O14519 115 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 SEC24DO94855 1032 aaPredicted RBP17.38■□□□□ 0.37
CHTOP-202ENST00000368687 CPA3P15088 417 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 BUD31P41223 144 aaPredicted RBP17.38■□□□□ 0.37
CHTOP-202ENST00000368687 EFNA3P52797 238 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 CDH13P55290 713 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 TAS2R50P59544 299 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 MFAP5Q13361 173 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 SERTAD2Q14140 314 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 BTBD16Q32M84 506 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 UNC50Q53HI1 259 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 CFAP157Q5JU67 520 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 LETMD1Q6P1Q0 360 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 ZNF793Q6ZN11 406 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 UBE3DQ7Z6J8 389 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 C4orf33Q8N1A6 199 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 TRPC4APQ8TEL6 797 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 SREK1Q8WXA9 508 aaKnown RBP17.38■□□□□ 0.37
CHTOP-202ENST00000368687 TSLPQ969D9 159 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 DDX31Q9H8H2 851 aaKnown RBP17.38■□□□□ 0.37
CHTOP-202ENST00000368687 MMP25Q9NPA2 562 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 B3GNT3Q9Y2A9 372 aa17.38■□□□□ 0.37
CHTOP-202ENST00000368687 DYTNA2CJ06 578 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 G3V2L1 256 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 CTNSO60931 367 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 DNAJB6O75190 326 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 ZIC2O95409 532 aaPredicted RBP17.37■□□□□ 0.37
CHTOP-202ENST00000368687 ESRRBO95718 433 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 MAOAP21397 527 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 LIPMQ5VYY2 423 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 CYP20A1Q6UW02 462 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 SRRM1Q8IYB3 904 aaKnown RBP17.37■□□□□ 0.37
CHTOP-202ENST00000368687 LGI4Q8N135 537 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 FAM47BQ8NA70 645 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 BRIX1Q8TDN6 353 aaKnown RBP17.37■□□□□ 0.37
CHTOP-202ENST00000368687 SELENOMQ8WWX9 145 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 WDR77Q9BQA1 342 aaPredicted RBP17.37■□□□□ 0.37
CHTOP-202ENST00000368687 MESP1Q9BRJ9 268 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 RNF32Q9H0A6 362 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 WDR41Q9HAD4 459 aa17.37■□□□□ 0.37
CHTOP-202ENST00000368687 OXSMQ9NWU1 459 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms