RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 FCRL5Q96RD9 977 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 ERVK-6Q9BXR3 956 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 DPAGT1Q9H3H5 408 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 WDR26Q9H7D7 661 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 ZDHHC3Q9NYG2 299 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 DNAJB4Q9UDY4 337 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 CRYM-AS1A6NIL9 109 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 ZNF254O75437 659 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 RPL7P18124 248 aaKnown RBP11.66□□□□□ -0.54
PCF11-201ENST00000298281 RPP30P78346 268 aaKnown RBP11.66□□□□□ -0.54
PCF11-201ENST00000298281 SLX4IPQ5VYV7 408 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 Q8N402 240 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 PSMG2Q969U7 264 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 MAPKAP1Q9BPZ7 522 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 TTTY10Q9BZA0 68 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 ZNF442Q9H7R0 627 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 FBRSL1Q9HCM7 1045 aaKnown RBP11.66□□□□□ -0.54
PCF11-201ENST00000298281 FKBPLQ9UIM3 349 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 CH25HO95992 272 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 EPHA1P21709 976 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 SLC2A5P22732 501 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 NMBRP28336 390 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 LCN1P31025 176 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 OTX2P32243 289 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 ALDH3B1P43353 468 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 EEFSECP57772 596 aaKnown RBP11.66□□□□□ -0.54
PCF11-201ENST00000298281 MVKQ03426 396 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 TREML2Q5T2D2 321 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 GPR149Q86SP6 731 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 CERS5Q8N5B7 392 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 GALNT6Q8NCL4 622 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 FCAMRQ8WWV6 532 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 TMEM209Q96SK2 561 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 ACTR6Q9GZN1 396 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 SLC32A1Q9H598 525 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 NANSQ9NR45 359 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 TAS2R10Q9NYW0 307 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 PTTG2Q9NZH5 202 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 PCDHGA7Q9Y5G6 932 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 ZNF780AO75290 641 aaPredicted RBP11.66□□□□□ -0.54
PCF11-201ENST00000298281 ARL6IP5O75915 188 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 CST3P01034 146 aaPredicted RBP11.66□□□□□ -0.54
PCF11-201ENST00000298281 TYRP1P17643 537 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 DNAJB1P25685 340 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 MAPK3P27361 379 aaPredicted RBP11.66□□□□□ -0.54
PCF11-201ENST00000298281 GDI1P31150 447 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 SLC15A1P46059 708 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 ESPNLQ6ZVH7 1005 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 SKA3Q8IX90 412 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 ARL14EPQ8N8R7 260 aaPredicted RBP11.66□□□□□ -0.54
PCF11-201ENST00000298281 OR6Q1Q8NGQ2 317 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 KCNC2Q96PR1 638 aa11.66□□□□□ -0.54
PCF11-201ENST00000298281 SLC35F4A4IF30 521 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 STMND1H3BQB6 276 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 C8BP07358 591 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 PFKLP17858 780 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 PON3Q15166 354 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 RSU1Q15404 277 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 ZNF781Q8N8C0 355 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 DCBLD1Q8N8Z6 715 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 OR8K3Q8NH51 312 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 FUZQ9BT04 418 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 ABCB7O75027 752 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 OR4Q2P0C623 313 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 IDH3AP50213 366 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 TUBA3CQ13748 450 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 FBXO48Q5FWF7 155 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 PACRGLQ8N7B6 248 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 IL17RCQ8NAC3 791 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 FBXL8Q96CD0 374 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 CMTM7Q96FZ5 175 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 CYP2S1Q96SQ9 504 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 NAA11Q9BSU3 229 aaPredicted RBP11.65□□□□□ -0.54
PCF11-201ENST00000298281 LRRN3Q9H3W5 708 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 ZNF446Q9NWS9 450 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 FZD1Q9UP38 647 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 A6NL46 340 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 ZNF99A8MXY4 864 aaPredicted RBP11.65□□□□□ -0.54
PCF11-201ENST00000298281 H6PDO95479 791 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 SNHG28P0DPA3 235 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 SLC6A6P31641 620 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 EXOC3L2Q2M3D2 409 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 C7orf50Q9BRJ6 194 aaKnown RBP11.65□□□□□ -0.54
PCF11-201ENST00000298281 SAMD10Q9BYL1 202 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 SLC6A16Q9GZN6 736 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 SLC22A4Q9H015 551 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 ATXN7L1Q9ULK2 861 aaPredicted RBP11.65□□□□□ -0.54
PCF11-201ENST00000298281 TRAV6A0A075B6T7 132 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 FAM155BO75949 473 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 PRKD3O94806 890 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 TFPTP0C1Z6 253 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 RAB28P51157 221 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 SMSP52788 366 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 ADGRE1Q14246 886 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 LDB1Q86U70 411 aaPredicted RBP11.65□□□□□ -0.54
PCF11-201ENST00000298281 NIPA2Q8N8Q9 360 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 CREB3L1Q96BA8 519 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 ZNF681Q96N22 645 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 DCBLD2Q96PD2 775 aa11.65□□□□□ -0.54
PCF11-201ENST00000298281 VSX1Q9NZR4 365 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms