RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 TRBV11-1A0A0K0K1C0 115 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 URI1O94763 535 aaPredicted RBP15.3■□□□□ 0.04
COLCA2-207ENST00000639470 RFC3P40938 356 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 MSH2P43246 934 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 LIM2P55344 173 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 RAB38P57729 211 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 UAP1Q16222 522 aaPredicted RBP15.3■□□□□ 0.04
COLCA2-207ENST00000639470 ADPRMQ3LIE5 342 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 C8orf74Q6P047 294 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.3■□□□□ 0.04
COLCA2-207ENST00000639470 RPS19BP1Q86WX3 136 aaKnown RBP15.3■□□□□ 0.04
COLCA2-207ENST00000639470 KRT78Q8N1N4 520 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 SLC5A8Q8N695 610 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 APCDD1LQ8NCL9 501 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 OR2L5Q8NG80 312 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 SUN3Q8TAQ9 357 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 PTCD3Q96EY7 689 aaKnown RBP15.3■□□□□ 0.04
COLCA2-207ENST00000639470 SCMH1Q96GD3 660 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 FRMD6Q96NE9 622 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 CD244Q9BZW8 370 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 REXO4Q9GZR2 422 aaKnown RBP15.3■□□□□ 0.04
COLCA2-207ENST00000639470 PRDM7Q9NQW5 492 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 PRTFDC1Q9NRG1 225 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 ZNF358Q9NW07 568 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 NINJ2Q9NZG7 142 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 GPRC5BQ9NZH0 403 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 SEC14L3Q9UDX4 400 aa15.3■□□□□ 0.04
COLCA2-207ENST00000639470 DMGDHQ9UI17 866 aaKnown RBP15.3■□□□□ 0.04
COLCA2-207ENST00000639470 NBPF19A0A087WUL8 3843 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 TRGV8A0A0C4DH27 118 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 URADA6NGE7 173 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 ANKDD1BA6NHY2 528 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 NPIPA5E9PKD4 350 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 CYR61O00622 381 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 PRKRAO75569 313 aaKnown RBP15.29■□□□□ 0.04
COLCA2-207ENST00000639470 CLEC3AO75596 197 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 TGFB1P01137 390 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 C2P06681 752 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 GSTA2P09210 222 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 LTA4HP09960 611 aaKnown RBP15.29■□□□□ 0.04
COLCA2-207ENST00000639470 PCNAP12004 261 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 STX2P32856 288 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 MLF1P58340 268 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 AP2B1P63010 937 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 IRF8Q02556 426 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 INAQ16352 499 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 PLD6Q8N2A8 252 aaKnown RBP15.29■□□□□ 0.04
COLCA2-207ENST00000639470 TCAIMQ8N3R3 496 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 CPSF7Q8N684 471 aaKnown RBP15.29■□□□□ 0.04
COLCA2-207ENST00000639470 UHMK1Q8TAS1 419 aaKnown RBP15.29■□□□□ 0.04
COLCA2-207ENST00000639470 ZNF473Q8WTR7 871 aaKnown RBP15.29■□□□□ 0.04
COLCA2-207ENST00000639470 NCLNQ969V3 563 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 WDR34Q96EX3 536 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 FAR2Q96K12 515 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 MAPKAP1Q9BPZ7 522 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 NT5DC2Q9H857 520 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 SNX15Q9NRS6 342 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 LRFN1Q9P244 771 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 TINAGQ9UJW2 476 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 NPIPA1Q9UND3 350 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 UNC79Q9P2D8 2635 aa15.29■□□□□ 0.04
COLCA2-207ENST00000639470 WASHC1A8K0Z3 465 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 B3GALT2O43825 422 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 KERAO60938 352 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 LDB3O75112 727 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 SP1P08047 785 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 GRNP28799 593 aaKnown RBP15.28■□□□□ 0.04
COLCA2-207ENST00000639470 TAS2R50P59544 299 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 SKP1P63208 163 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 CAV1Q03135 178 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 SLC13A2Q13183 592 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 DDX39BQ13838 428 aaKnown RBP15.28■□□□□ 0.04
COLCA2-207ENST00000639470 ZRSR2Q15696 482 aaKnown RBP15.28■□□□□ 0.04
COLCA2-207ENST00000639470 C3AR1Q16581 482 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 MAPKAPK3Q16644 382 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 TBC1D1Q86TI0 1168 aaPredicted RBP15.28■□□□□ 0.04
COLCA2-207ENST00000639470 TEX9Q8N6V9 391 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 ZNF592Q92610 1267 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 MS4A8Q9BY19 250 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 PHACTR1Q9C0D0 580 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 OR51B5Q9H339 312 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 EHD1Q9H4M9 534 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 CNOT10Q9H9A5 744 aaKnown RBP15.28■□□□□ 0.04
COLCA2-207ENST00000639470 NUDT4Q9NZJ9 180 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 KCMF1Q9P0J7 381 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 DAPP1Q9UN19 280 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 ZGRF1Q86YA3 2104 aa15.28■□□□□ 0.04
COLCA2-207ENST00000639470 TMEM200CA6NKL6 621 aa15.27■□□□□ 0.04
COLCA2-207ENST00000639470 SLC25A12O75746 678 aa15.27■□□□□ 0.04
COLCA2-207ENST00000639470 SIX3O95343 332 aaPredicted RBP15.27■□□□□ 0.04
COLCA2-207ENST00000639470 CRYABP02511 175 aaKnown RBP15.27■□□□□ 0.04
COLCA2-207ENST00000639470 ALDOAP04075 364 aaKnown RBP15.27■□□□□ 0.04
COLCA2-207ENST00000639470 S100BP04271 92 aaPredicted RBP15.27■□□□□ 0.04
COLCA2-207ENST00000639470 EEF1DP29692 281 aaKnown RBP15.27■□□□□ 0.04
COLCA2-207ENST00000639470 PIK3CGP48736 1102 aa15.27■□□□□ 0.04
COLCA2-207ENST00000639470 GPR143P51810 404 aa15.27■□□□□ 0.04
COLCA2-207ENST00000639470 MTTPP55157 894 aa15.27■□□□□ 0.04
COLCA2-207ENST00000639470 GPR85P60893 370 aa15.27■□□□□ 0.04
COLCA2-207ENST00000639470 CDSNQ15517 529 aa15.27■□□□□ 0.04
COLCA2-207ENST00000639470 SLC25A25Q6KCM7 469 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms