RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 DNAAF2Q9NVR5 837 aaKnown RBP13.12□□□□□ -0.31
TPM1-215ENST00000558868 ARMC1Q9NVT9 282 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 POMT2Q9UKY4 750 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 BTBD3Q9Y2F9 522 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 KLHL20Q9Y2M5 609 aa13.12□□□□□ -0.31
TPM1-215ENST00000558868 ARHGEF17Q96PE2 2063 aaPredicted RBP13.12□□□□□ -0.31
TPM1-215ENST00000558868 CASQ2O14958 399 aaPredicted RBP13.11□□□□□ -0.31
TPM1-215ENST00000558868 PDPK1O15530 556 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 ZSCAN9O15535 394 aaPredicted RBP13.11□□□□□ -0.31
TPM1-215ENST00000558868 HNRNPRO43390 633 aaKnown RBP13.11□□□□□ -0.31
TPM1-215ENST00000558868 NOBOXO60393 691 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 PROS1P07225 676 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 FCGR1AP12314 374 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 GPX2P18283 190 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 ATP5A1P25705 553 aaKnown RBP13.11□□□□□ -0.31
TPM1-215ENST00000558868 DHPSP49366 369 aaPredicted RBP13.11□□□□□ -0.31
TPM1-215ENST00000558868 ARRB1P49407 418 aaPredicted RBP13.11□□□□□ -0.31
TPM1-215ENST00000558868 EPHA4P54764 986 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 OR4D2P58180 307 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 MC1RQ01726 317 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 SLAMF1Q13291 335 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 SUZ12Q15022 739 aaKnown RBP13.11□□□□□ -0.31
TPM1-215ENST00000558868 MUM1Q2TAK8 710 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 C14orf28Q4W4Y0 310 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 ZNF385BQ569K4 471 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 RNF44Q7L0R7 432 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 ABHD13Q7L211 337 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 VN1R4Q7Z5H5 301 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 CLECL1Q8IZS7 167 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 GAB3Q8WWW8 586 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 OR5P2Q8WZ92 322 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 TEFMQ96QE5 360 aaKnown RBP13.11□□□□□ -0.31
TPM1-215ENST00000558868 OR2A5Q96R48 311 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 TACO1Q9BSH4 297 aaKnown RBP13.11□□□□□ -0.31
TPM1-215ENST00000558868 KLHL31Q9H511 634 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 PIF1Q9H611 641 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 CD320Q9NPF0 282 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 PRDM7Q9NQW5 492 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 CCM2LQ9NUG4 571 aaPredicted RBP13.11□□□□□ -0.31
TPM1-215ENST00000558868 TAS2R9Q9NYW1 312 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 TAS2R7Q9NYW3 318 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 GMPR2Q9P2T1 348 aaKnown RBP13.11□□□□□ -0.31
TPM1-215ENST00000558868 PILRAQ9UKJ1 303 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 DCHS1Q96JQ0 3298 aa13.11□□□□□ -0.31
TPM1-215ENST00000558868 KMT2BQ9UMN6 2715 aaPredicted RBP13.11□□□□□ -0.31
TPM1-215ENST00000558868 TXNDC9O14530 226 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 PEX1O43933 1283 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 TMPRSS11DO60235 418 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 KRT75O95678 551 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 C6orf47O95873 294 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 ABCB1P08183 1280 aaPredicted RBP13.1□□□□□ -0.31
TPM1-215ENST00000558868 TDGF1P13385 188 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 CDH3P22223 829 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 CTSKP43235 329 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 RXRGP48443 463 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 ALDH9A1P49189 494 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 TRIP10Q15642 601 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 CYP51A1Q16850 503 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 ZC3H12BQ5HYM0 836 aaKnown RBP13.1□□□□□ -0.31
TPM1-215ENST00000558868 CPZQ66K79 652 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 PMS2CLQ68D20 193 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 MRM1Q6IN84 353 aaKnown RBP13.1□□□□□ -0.31
TPM1-215ENST00000558868 TSSK4Q6SA08 328 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 ACOT4Q8N9L9 421 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 ZBED6CLQ96FA7 236 aaPredicted RBP13.1□□□□□ -0.31
TPM1-215ENST00000558868 EPB41L1Q9H4G0 881 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 IKZF5Q9H5V7 419 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 YY1AP1Q9H869 796 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 TPT1P8Q9HAU6 139 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 NEUROD4Q9HD90 331 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 SLC6A13Q9NSD5 602 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 ACSS1Q9NUB1 689 aaPredicted RBP13.1□□□□□ -0.31
TPM1-215ENST00000558868 PHF11Q9UIL8 331 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 ANAPC2Q9UJX6 822 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 C15orf41Q9Y2V0 281 aa13.1□□□□□ -0.31
TPM1-215ENST00000558868 EML5Q05BV3 1969 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 A0A0J9YVX5 310 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 A0A1B0GVT2 93 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 C1orf226A1L170 272 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 RHPN2P1A8MT19 583 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 CXCR6O00574 342 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 PPM1DO15297 605 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 CTSVO60911 334 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 PDGFBP01127 241 aaPredicted RBP13.09□□□□□ -0.31
TPM1-215ENST00000558868 HOXB3P14651 431 aaPredicted RBP13.09□□□□□ -0.31
TPM1-215ENST00000558868 NCK1P16333 377 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 TYRP1P17643 537 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 UQCRC2P22695 453 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 CAPZBP47756 277 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 GZMMP51124 257 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 BTN3A2P78410 334 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 CSTF1Q05048 431 aaKnown RBP13.09□□□□□ -0.31
TPM1-215ENST00000558868 MLC1Q15049 377 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 DEFB133Q30KQ1 61 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 TBCELQ5QJ74 424 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 C6orf132Q5T0Z8 1188 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 NDUFAF5Q5TEU4 345 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 ZNF793Q6ZN11 406 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 C1orf210Q8IVY1 113 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 SFTPA2Q8IWL1 248 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms