RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 TERB2Q8NHR7 220 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 SCAMP5Q8TAC9 235 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 SLC35B2Q8TB61 432 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 FCAMRQ8WWV6 532 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 KLRF1Q9NZS2 232 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 B4DGG1 531 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 INMT-MINDY4F8WBC2 141 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 KHNYNO15037 678 aaKnown RBP9.62□□□□□ -0.87
COL4A6-208ENST00000538570 NUPL2O15504 423 aaKnown RBP9.62□□□□□ -0.87
COL4A6-208ENST00000538570 FOXD2O60548 495 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-208ENST00000538570 RFPL2O75678 378 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 RPL17P18621 184 aaKnown RBP9.62□□□□□ -0.87
COL4A6-208ENST00000538570 HTR2AP28223 471 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 VIPR1P32241 457 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 ABHD18Q0P651 414 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 C6orf89Q6UWU4 347 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 SLC15A3Q8IY34 581 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 FAM86B1Q8N7N1 296 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 TRUB1Q8WWH5 349 aaKnown RBP9.62□□□□□ -0.87
COL4A6-208ENST00000538570 BORCS8Q96FH0 119 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF486Q96H40 463 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF317Q96PQ6 595 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-208ENST00000538570 MKRN2Q9H000 416 aaKnown RBP9.62□□□□□ -0.87
COL4A6-208ENST00000538570 OSBPL2Q9H1P3 480 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 PPIL3Q9H2H8 161 aaKnown RBP9.62□□□□□ -0.87
COL4A6-208ENST00000538570 VNN3Q9NY84 501 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 FBXL3Q9UKT7 428 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 A0A1W2PP18 115 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 GPR89AB7ZAQ6 455 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 GPR89BP0CG08 455 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 GP1BBP13224 206 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 GALEQ14376 348 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 PTGR1Q14914 329 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 PGM2L1Q6PCE3 622 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 SMIM15Q7Z3B0 74 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 RASGRP3Q8IV61 690 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 TMEM41AQ96HV5 264 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 FBXL20Q96IG2 436 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 MMP27Q9H306 513 aa9.62□□□□□ -0.87
COL4A6-208ENST00000538570 LOC730098B7Z3J9 87 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 DLX3O60479 287 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 ICMTO60725 284 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 SOX14O95416 240 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 VNN1O95497 513 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 PABPC4LP0CB38 370 aaKnown RBP9.61□□□□□ -0.87
COL4A6-208ENST00000538570 ODF4Q2M2E3 257 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 PAPD4Q6PIY7 484 aaKnown RBP9.61□□□□□ -0.87
COL4A6-208ENST00000538570 LYSMD3Q7Z3D4 306 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 CASTOR1Q8WTX7 329 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 KCNN1Q92952 543 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 SLCO2A1Q92959 643 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 SIX2Q9NPC8 291 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 GALPQ9UBC7 116 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 MGAT4BQ9UQ53 548 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 KIF1AQ12756 1690 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 PROM1O43490 865 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 FARS2O95363 451 aaKnown RBP9.61□□□□□ -0.87
COL4A6-208ENST00000538570 PIM1P11309 404 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-208ENST00000538570 RPS3AP61247 264 aaKnown RBP9.61□□□□□ -0.87
COL4A6-208ENST00000538570 SNTA1Q13424 505 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 RIN1Q13671 783 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 KCNJ11Q14654 390 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 CHADLQ6NUI6 762 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 NPAS3Q8IXF0 933 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 SH3RF2Q8TEC5 729 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 MED30Q96HR3 178 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 BEX1Q9HBH7 125 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 DMAC2Q9NW81 257 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 FNIP2Q9P278 1114 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 PCDHB14Q9Y5E9 798 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 BLOC1S5-TXNDC5H3BN57 136 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 KLF11O14901 512 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 FLRT2O43155 660 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 RFPL1O75677 317 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 NKX6-1P78426 367 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-208ENST00000538570 FGL1Q08830 312 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 HNRNPA0Q13151 305 aaKnown RBP9.61□□□□□ -0.87
COL4A6-208ENST00000538570 ALG10BQ5I7T1 473 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 BRAT1Q6PJG6 821 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 CLEC20AQ6ZU45 233 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 PIM3Q86V86 326 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 SMPDL3AQ92484 453 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 MAELQ96JY0 434 aaKnown RBP9.61□□□□□ -0.87
COL4A6-208ENST00000538570 OR10A4Q9H209 315 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 TMEM184CQ9NVA4 438 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 DNAJC27Q9NZQ0 273 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 A0A1B0GVG6 124 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 TTC24A2A3L6 582 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-208ENST00000538570 H3BSH0 61 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 MEN1O00255 615 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 UGT2B10P36537 528 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 IRF5Q13568 498 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 TPGS2Q68CL5 300 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 LBX2Q6XYB7 198 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 SPATC1Q76KD6 591 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 OR8S1Q8NH09 359 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 LILRB4Q8NHJ6 448 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 NINJ1Q92982 152 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 DERL2Q9GZP9 239 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 TPT1P8Q9HAU6 139 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms