RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SCELO95171 688 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 TGFB1P01137 390 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 PRR35P0CG20 571 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 CASRP41180 1078 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 SSR2P43308 183 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 LIM2P55344 173 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 RPS13P62277 151 aaKnown RBP12.13□□□□□ -0.47
COL5A1-206ENST00000465877 ZRSR2Q15696 482 aaKnown RBP12.13□□□□□ -0.47
COL5A1-206ENST00000465877 NSDHLQ15738 373 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 NADK2Q4G0N4 442 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 TMEM35AQ53FP2 167 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 PAPD4Q6PIY7 484 aaKnown RBP12.13□□□□□ -0.47
COL5A1-206ENST00000465877 RIPOR1Q6ZS17 1223 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 SH2D5Q6ZV89 423 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 FAM47BQ8NA70 645 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 PLPP5Q8NEB5 264 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 SRFBP1Q8NEF9 429 aaKnown RBP12.13□□□□□ -0.47
COL5A1-206ENST00000465877 OR4F6Q8NGB9 312 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 WDR20Q8TBZ3 569 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 BRIX1Q8TDN6 353 aaKnown RBP12.13□□□□□ -0.47
COL5A1-206ENST00000465877 CSF3RQ99062 836 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 WDR77Q9BQA1 342 aaPredicted RBP12.13□□□□□ -0.47
COL5A1-206ENST00000465877 NTMT1Q9BV86 223 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 TRIM4Q9C037 500 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 ROGDIQ9GZN7 287 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 OR51B5Q9H339 312 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 ZBTB20Q9HC78 741 aaPredicted RBP12.13□□□□□ -0.47
COL5A1-206ENST00000465877 DCDC2Q9UHG0 476 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 DAPP1Q9UN19 280 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 SHANK1Q9Y566 2161 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 IGKV3D-11A0A0A0MRZ8 115 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 A0A1B0GTL3 188 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 FAM227AF5H4B4 570 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 SAP18O00422 153 aaKnown RBP12.12□□□□□ -0.47
COL5A1-206ENST00000465877 PLPP1O14494 284 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 DLX3O60479 287 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 PRMT3O60678 531 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 SORBS2O94875 1100 aaKnown RBP12.12□□□□□ -0.47
COL5A1-206ENST00000465877 OTCP00480 354 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 SERPINA7P05543 415 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 UQCRHP07919 91 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 ITGAMP11215 1152 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 TSPAN8P19075 237 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 MAOAP21397 527 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 HIST1H1TP22492 207 aaPredicted RBP12.12□□□□□ -0.47
COL5A1-206ENST00000465877 ATP5F1P24539 256 aaPredicted RBP12.12□□□□□ -0.47
COL5A1-206ENST00000465877 TSFMP43897 325 aaKnown RBP12.12□□□□□ -0.47
COL5A1-206ENST00000465877 RAP1GDS1P52306 607 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 HNRNPFP52597 415 aaKnown RBP12.12□□□□□ -0.47
COL5A1-206ENST00000465877 CDH13P55290 713 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 AP2B1P63010 937 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 BTG2P78543 158 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 TLE1Q04724 770 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 IFFO1Q0D2I5 559 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 RUNX2Q13950 521 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 SFT2D3Q587I9 215 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 ZNF678Q5SXM1 525 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 AGAP7PQ5VUJ5 663 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 SLC6A19Q695T7 634 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 PLAG1Q6DJT9 500 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 LETMD1Q6P1Q0 360 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 IGFL3Q6UXB1 125 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 CHSY3Q70JA7 882 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 UBE3DQ7Z6J8 389 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 SLC22A9Q8IVM8 553 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 C4orf33Q8N1A6 199 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 MREGQ8N565 214 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 SIRT6Q8N6T7 355 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 AMER2Q8N7J2 671 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 RBMXL3Q8N7X1 1067 aaKnown RBP12.12□□□□□ -0.47
COL5A1-206ENST00000465877 TMEM52Q8NDY8 209 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 TM9SF4Q92544 642 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 IMMP1LQ96LU5 166 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 PTCHD1Q96NR3 888 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 AGAP4Q96P64 663 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 LPAR4Q99677 370 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 CENPKQ9BS16 269 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 TBCDQ9BTW9 1192 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 SORBS1Q9BX66 1292 aaKnown RBP12.12□□□□□ -0.47
COL5A1-206ENST00000465877 PARD6BQ9BYG5 372 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 PRDM9Q9NQV7 894 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 PRDM7Q9NQW5 492 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 MRPS33Q9Y291 106 aaKnown RBP12.12□□□□□ -0.47
COL5A1-206ENST00000465877 MMACHCQ9Y4U1 282 aa12.12□□□□□ -0.47
COL5A1-206ENST00000465877 TCRBV16S1A1N1A0A5B0 115 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 TGFBR3LH3BV60 316 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 COPEO14579 308 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 SUPT7LO94864 414 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 ETHE1O95571 254 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 PROCP04070 461 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 KRT4P19013 534 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 ATP5A1P25705 553 aaKnown RBP12.11□□□□□ -0.47
COL5A1-206ENST00000465877 CRHR1P34998 444 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 SOX11P35716 441 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 OR4D2P58180 307 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 CLCQ05315 142 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 RCN2Q14257 317 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 BTBD16Q32M84 506 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 CRB2Q5IJ48 1285 aa12.11□□□□□ -0.47
COL5A1-206ENST00000465877 C10orf62Q5T681 223 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms