RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 TXNDC8Q6A555 127 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 RETSATQ6NUM9 610 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 TMEM150AQ86TG1 271 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 NLRP8Q86W28 1048 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 RAB43Q86YS6 212 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 MMP21Q8N119 569 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 SLC34A3Q8N130 599 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 CELF5Q8N6W0 485 aaKnown RBP11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 VPS37AQ8NEZ2 397 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 TMCO6Q96DC7 493 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 C2orf49Q9BVC5 232 aaPredicted RBP11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 SRRQ9GZT4 340 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 ASAH2Q9NR71 780 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 THSD1Q9NS62 852 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 NUFIP1Q9UHK0 495 aaKnown RBP11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 RAB23Q9ULC3 237 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 SH2B3Q9UQQ2 575 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 KLHL20Q9Y2M5 609 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 TMA7Q9Y2S6 64 aaKnown RBP11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 LSM2Q9Y333 95 aaKnown RBP11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 HCN4Q9Y3Q4 1203 aa11.23□□□□□ -0.61
PDZRN3-203ENST00000462146 A0A075B6Q4 140 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 A0A0B4J293 547 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CENPXA8MT69 81 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 FFAR1O14842 300 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 SGTAO43765 313 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 IGSF6O95976 241 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CSF2P04141 144 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 HBQ1P09105 142 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CLEC2LP0C7M8 214 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 MPC1LP0DKB6 136 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 SSTR4P31391 388 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 TIE1P35590 1138 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 HNF4AP41235 474 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CRYBB2P43320 205 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 PRIM2P49643 509 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 FLT3LGP49771 235 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CRISP1P54107 249 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 LIM2P55344 173 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 HOXC5Q00444 222 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CAMK2BQ13554 666 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 DUSP7Q16829 419 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 SLC5A12Q1EHB4 618 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 TRIM60Q495X7 471 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 TTC23LQ6PF05 361 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 TMPRSS11AQ6ZMR5 421 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 LAS2Q8IYD9 372 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 ST13P5Q8NFI4 369 aaPredicted RBP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 OR7G3Q8NG95 312 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 C9orf43Q8TAL5 461 aaPredicted RBP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 C2orf15Q8WU43 125 aaKnown RBP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 RNF31Q96EP0 1072 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 SCRN2Q96FV2 425 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 SLC6A18Q96N87 628 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 SNX18Q96RF0 628 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 PIP5K1AQ99755 562 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 VN1R3Q9BXE9 311 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 RSPO3Q9BXY4 272 aaPredicted RBP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 PRRG3Q9BZD7 231 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 DYRK4Q9NR20 520 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 C1GALT1Q9NS00 363 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CLN6Q9NWW5 311 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CRNNQ9UBG3 495 aaPredicted RBP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 STOML2Q9UJZ1 356 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CORO2BQ9UQ03 480 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 PCDHB7Q9Y5E2 793 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 PRRC2BQ5JSZ5 2229 aaKnown RBP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CYP17A1P05093 508 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 SCG5P05408 212 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 TIA1P31483 386 aaKnown RBP eCLIP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 DDOSTP39656 456 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 PSPHP78330 225 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CDK6Q00534 326 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CAP1Q01518 475 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 HYAL2Q12891 473 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CRHR2Q13324 411 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 TSTA3Q13630 321 aaPredicted RBP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 TIMM50Q3ZCQ8 353 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 FRMPD2BQ6IN97 320 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 GRHL2Q6ISB3 625 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 AGTRAPQ6RW13 159 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 FLCNQ8NFG4 579 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 OR2AP1Q8NGE2 309 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 CHTF18Q8WVB6 975 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 MYLIPQ8WY64 445 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 ZFYVE19Q96K21 471 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 ZDHHC6Q9H6R6 413 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 STOX2Q9P2F5 926 aaPredicted RBP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 PDE4DIPQ5VU43 2346 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 TRBC2A0A5B9 178 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 RNASET2O00584 256 aaKnown RBP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 PLD2O14939 933 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 UGT2B17O75795 530 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 ELNP15502 786 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 PRKCAP17252 672 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 PPIBP23284 216 aaKnown RBP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 SOAT1P35610 550 aa11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 TUFMP49411 452 aaKnown RBP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 RPS26P62854 115 aaKnown RBP11.22□□□□□ -0.61
PDZRN3-203ENST00000462146 MEF2AQ02078 507 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms