RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 MXD1Q05195 221 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 GRK1Q15835 563 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 EXOC3L2Q2M3D2 409 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 GPR139Q6DWJ6 353 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 SCD5Q86SK9 330 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 Q8N402 240 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 NANOGP1Q8N7R0 232 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 OR52H1Q8NGJ2 320 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 GFM1Q96RP9 751 aaKnown RBP13.54□□□□□ -0.24
TOP3B-214ENST00000457270 SLC6A17Q9H1V8 727 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 HEXA-AS1Q9H8Q6 139 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 FOLH1BQ9HBA9 442 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 NPIPB8E9PQR5 432 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 LINC01387J3KSC0 135 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 FABP7O15540 132 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 PRAMEF11O60813 436 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 GUCA1CO95843 209 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 HK1P19367 917 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 LPOP22079 712 aaPredicted RBP13.54□□□□□ -0.24
TOP3B-214ENST00000457270 PCGF2P35227 344 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 GDF5P43026 501 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 GBX2P52951 348 aaPredicted RBP13.54□□□□□ -0.24
TOP3B-214ENST00000457270 BTG1P62324 171 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 SPIBQ01892 262 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 GRM7Q14831 915 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 MS4A13Q5J8X5 152 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 ZNF621Q6ZSS3 439 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 ADGRG3Q86Y34 549 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 BBS7Q8IWZ6 715 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 LAS2Q8IYD9 372 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 SLC34A3Q8N130 599 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 STK40Q8N2I9 435 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 PROKR2Q8NFJ6 384 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 ZNF431Q8TF32 576 aaPredicted RBP13.54□□□□□ -0.24
TOP3B-214ENST00000457270 CMTM7Q96FZ5 175 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 RTP3Q9BQQ7 232 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 TMEM43Q9BTV4 400 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 FAM126AQ9BYI3 521 aaPredicted RBP13.54□□□□□ -0.24
TOP3B-214ENST00000457270 RANBP3Q9H6Z4 567 aaPredicted RBP13.54□□□□□ -0.24
TOP3B-214ENST00000457270 WWOXQ9NZC7 414 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 CLEC2DQ9UHP7 191 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 HRH3Q9Y5N1 445 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 CDH10Q9Y6N8 788 aa13.54□□□□□ -0.24
TOP3B-214ENST00000457270 RPS10-NUDT3A0A1W2PQS6 291 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 IQCF5A8MTL0 148 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 SGK494L7N484 410 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 QSOX1O00391 747 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 PCDH17O14917 1159 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 PLOD3O60568 738 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 TLR5O60602 858 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 RAMP2O60895 175 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 AP2A2O94973 939 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 PDYNP01213 254 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 HBQ1P09105 142 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 CKMT1AP12532 417 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 EPB42P16452 691 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 APEX1P27695 318 aaKnown RBP13.53□□□□□ -0.24
TOP3B-214ENST00000457270 SDC2P34741 201 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 WNT3P56703 355 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 SRSF11Q05519 484 aaKnown RBP13.53□□□□□ -0.24
TOP3B-214ENST00000457270 FAM46DQ8NEK8 389 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 SPPL2AQ8TCT8 520 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 FAM193BQ96PV7 902 aaPredicted RBP13.53□□□□□ -0.24
TOP3B-214ENST00000457270 FAM129BQ96TA1 746 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 CRISPLD1Q9H336 500 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 SAV1Q9H4B6 383 aaPredicted RBP13.53□□□□□ -0.24
TOP3B-214ENST00000457270 TLR8Q9NR97 1041 aaKnown RBP13.53□□□□□ -0.24
TOP3B-214ENST00000457270 THSD1Q9NS62 852 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 FKBPLQ9UIM3 349 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 INMT-MINDY4F8WBC2 141 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 ZNF623O75123 536 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 PRPS1L1P21108 318 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 CDH12P55289 794 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 SNRPGP62308 76 aaKnown RBP13.53□□□□□ -0.24
TOP3B-214ENST00000457270 TMEM201Q5SNT2 666 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 TAPT1Q6NXT6 567 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 TMEM145Q8NBT3 493 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 FANK1Q8TC84 345 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 SORCS2Q96PQ0 1159 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 POLR2J2Q9GZM3 115 aaKnown RBP13.53□□□□□ -0.24
TOP3B-214ENST00000457270 NT5DC2Q9H857 520 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 PCDHB11Q9Y5F2 797 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 ALPK3Q96L96 1907 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 RRN3P2A6NIE6 340 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 WWP2O00308 870 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 LRATO95237 230 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 CLDN9O95484 217 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 LHCGRP22888 699 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 LIMS1P48059 325 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 SCRN3Q0VDG4 424 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 MADCAM1Q13477 382 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 ZNF273Q14593 569 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 TEAD4Q15561 434 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 ZRANB3Q5FWF4 1079 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 PRAMEF18Q5VWM3 479 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 BICRALQ6AI39 1079 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 ZNF730Q6ZMV8 503 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 SAMD7Q7Z3H4 446 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 IL17RCQ8NAC3 791 aa13.53□□□□□ -0.24
TOP3B-214ENST00000457270 OR52J3Q8NH60 311 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms