RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 GPR22Q99680 433 aa13.44□□□□□ -0.26
TNFRSF1A-203ENST00000437813 EGFL8Q99944 293 aa13.44□□□□□ -0.26
TNFRSF1A-203ENST00000437813 TRIM31Q9BZY9 425 aa13.44□□□□□ -0.26
TNFRSF1A-203ENST00000437813 CAB39LQ9H9S4 337 aa13.44□□□□□ -0.26
TNFRSF1A-203ENST00000437813 GPAMQ9HCL2 828 aa13.44□□□□□ -0.26
TNFRSF1A-203ENST00000437813 PLSCR2Q9NRY7 297 aa13.44□□□□□ -0.26
TNFRSF1A-203ENST00000437813 NSMCE4AQ9NXX6 385 aa13.44□□□□□ -0.26
TNFRSF1A-203ENST00000437813 GPRC5BQ9NZH0 403 aa13.44□□□□□ -0.26
TNFRSF1A-203ENST00000437813 GRHL1Q9NZI5 618 aa13.44□□□□□ -0.26
TNFRSF1A-203ENST00000437813 KCMF1Q9P0J7 381 aa13.44□□□□□ -0.26
TNFRSF1A-203ENST00000437813 SH3BGRL2Q9UJC5 107 aa13.44□□□□□ -0.26
TNFRSF1A-203ENST00000437813 SNX24Q9Y343 169 aa13.44□□□□□ -0.26
TNFRSF1A-203ENST00000437813 HRH3Q9Y5N1 445 aa13.44□□□□□ -0.26
TNFRSF1A-203ENST00000437813 A0A0G2JN53 185 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 FAM159BA6NKW6 160 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 C19orf84I3L1E1 186 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 ERI3O43414 337 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 ANKRD17O75179 2603 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 CD1DP15813 335 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 SSTR1P30872 391 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 PTGER4P35408 488 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 RAB38P57729 211 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 STXBP1P61764 594 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 GNG11P61952 73 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 PCDH1Q08174 1060 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 ILF2Q12905 390 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 MAPKAPK3Q16644 382 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 ABHD17CQ6PCB6 329 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 MDGA2Q7Z553 956 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 UBE3DQ7Z6J8 389 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 ZBED8Q8IZ13 594 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 CYP4X1Q8N118 509 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 SPATA6LQ8N4H0 392 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 ZFP62Q8NB50 900 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 PDPRQ8NCN5 879 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 OR2L5Q8NG80 312 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 C16orf52Q8NHV5 167 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 PHF10Q8WUB8 498 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 MAGED4Q96JG8 741 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 NAPGQ99747 312 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 TREX2Q9BQ50 279 aaPredicted RBP13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 RHBGQ9H310 441 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 CHST11Q9NPF2 352 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 PRDM7Q9NQW5 492 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 PTBP2Q9UKA9 531 aaKnown RBP13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 EML6Q6ZMW3 1958 aa13.43□□□□□ -0.26
TNFRSF1A-203ENST00000437813 TCRBV9S1A1TA0A576 114 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 A8MUA0 341 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 PSMD12O00232 456 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 PHGDHO43175 533 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 MYO1DO94832 1006 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 MLYCDO95822 493 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 ZNF24P17028 368 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 PTGER1P34995 402 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 GMPRP36959 345 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 CASP2P42575 452 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 KIR3DL1P43629 444 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 GPX6P59796 221 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 MRPS25P82663 173 aaKnown RBP13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 CMPK2Q5EBM0 449 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 FBXO48Q5FWF7 155 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 SULF2Q8IWU5 870 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 GHDCQ8N2G8 530 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 POGLUT1Q8NBL1 392 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 AGAP11Q8TF27 550 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 ESAMQ96AP7 390 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 CSF3RQ99062 836 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 KRT12Q99456 494 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 RBBP8Q99708 897 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 DEFB126Q9BYW3 111 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 DEPPQ9NTK1 212 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 DNAJC11Q9NVH1 559 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 RNF14Q9UBS8 474 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 PYCARDQ9ULZ3 195 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 DAPP1Q9UN19 280 aa13.42□□□□□ -0.26
TNFRSF1A-203ENST00000437813 TRBV11-1A0A0K0K1C0 115 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 NCF1BA6NI72 391 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 NCF1CA8MVU1 366 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 E9PLN8 166 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 EIF3HO15372 352 aaKnown RBP eCLIP13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 ITGA10O75578 1167 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 SCELO95171 688 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 CCDC166P0CW27 439 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 NCF1P14598 390 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 POU3F2P20265 443 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 CERS1P27544 350 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 CLCN2P51788 898 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 NR0B1P51843 470 aaKnown RBP13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 CASP6P55212 293 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 LIM2P55344 173 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 DLG1Q12959 904 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 DOC2AQ14183 400 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 XKR6Q5GH73 641 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 ZNF793Q6ZN11 406 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 C16orf47Q6ZP98 133 aaPredicted RBP13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 GPSM1Q86YR5 675 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 ZNF595Q8IYB9 648 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 TCAIMQ8N3R3 496 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 MARVELD2Q8N4S9 558 aa13.41□□□□□ -0.26
TNFRSF1A-203ENST00000437813 FAM98AQ8NCA5 519 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms