RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 ABHD17CQ6PCB6 329 aa16.6■□□□□ 0.25
HDDC3-201ENST00000330334 LRRC70Q7Z2Q7 622 aa16.6■□□□□ 0.25
HDDC3-201ENST00000330334 CCDC25Q86WR0 208 aa16.6■□□□□ 0.25
HDDC3-201ENST00000330334 ZNF595Q8IYB9 648 aa16.6■□□□□ 0.25
HDDC3-201ENST00000330334 SLC34A3Q8N130 599 aa16.6■□□□□ 0.25
HDDC3-201ENST00000330334 KIF2BQ8N4N8 673 aa16.6■□□□□ 0.25
HDDC3-201ENST00000330334 SRFBP1Q8NEF9 429 aaKnown RBP16.6■□□□□ 0.25
HDDC3-201ENST00000330334 B3GNT7Q8NFL0 401 aa16.6■□□□□ 0.25
HDDC3-201ENST00000330334 FBF1Q8TES7 1133 aa16.6■□□□□ 0.25
HDDC3-201ENST00000330334 CCT6BQ92526 530 aa16.6■□□□□ 0.25
HDDC3-201ENST00000330334 NUDT4Q9NZJ9 180 aa16.6■□□□□ 0.25
HDDC3-201ENST00000330334 LRFN1Q9P244 771 aa16.6■□□□□ 0.25
HDDC3-201ENST00000330334 MRPS33Q9Y291 106 aaKnown RBP16.6■□□□□ 0.25
HDDC3-201ENST00000330334 CLDN16Q9Y5I7 305 aa16.6■□□□□ 0.25
HDDC3-201ENST00000330334 CYR61O00622 381 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 KERAO60938 352 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 FAM155BO75949 473 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 S100BP04271 92 aaPredicted RBP16.59■□□□□ 0.25
HDDC3-201ENST00000330334 LTA4HP09960 611 aaKnown RBP16.59■□□□□ 0.25
HDDC3-201ENST00000330334 TPP2P29144 1249 aaPredicted RBP16.59■□□□□ 0.25
HDDC3-201ENST00000330334 DCTP40126 519 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 CYB561P49447 251 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 MTTPP55157 894 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 OC90Q02509 493 aaPredicted RBP16.59■□□□□ 0.25
HDDC3-201ENST00000330334 IRF8Q02556 426 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 EFTUD2Q15029 972 aaKnown RBP eCLIP16.59■□□□□ 0.25
HDDC3-201ENST00000330334 RAPH1Q70E73 1250 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 TBC1D1Q86TI0 1168 aaPredicted RBP16.59■□□□□ 0.25
HDDC3-201ENST00000330334 FJX1Q86VR8 437 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 SNX31Q8N9S9 440 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 APCDD1LQ8NCL9 501 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 C7orf57Q8NEG2 295 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 RHEBL1Q8TAI7 183 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 UBTD2Q8WUN7 234 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 UBE2E3Q969T4 207 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 ESAMQ96AP7 390 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 ATOH8Q96SQ7 321 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 DEFB126Q9BYW3 111 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 ROGDIQ9GZN7 287 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 ALG9Q9H6U8 611 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 PRDM7Q9NQW5 492 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 PRTFDC1Q9NRG1 225 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 ANKRD10Q9NXR5 420 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 DAPP1Q9UN19 280 aa16.59■□□□□ 0.25
HDDC3-201ENST00000330334 FCHO1O14526 889 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 ZG16O60844 167 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 TFEBP19484 476 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 CD22P20273 847 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 COL8A1P27658 744 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 SERPINB1P30740 379 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 CA7P43166 264 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 HLCSP50747 726 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 CLCN2P51788 898 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 GPR143P51810 404 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 PLA2G16P53816 162 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 CKAP4Q07065 602 aaKnown RBP16.58■□□□□ 0.24
HDDC3-201ENST00000330334 DLG1Q12959 904 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 CHIT1Q13231 466 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 TMEM35AQ53FP2 167 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 C1QL3Q5VWW1 255 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 MTFR2Q6P444 385 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 LAS2Q8IYD9 372 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 C17orf53Q8N3J3 647 aaPredicted RBP16.58■□□□□ 0.24
HDDC3-201ENST00000330334 FAM98AQ8NCA5 519 aaKnown RBP16.58■□□□□ 0.24
HDDC3-201ENST00000330334 GPR137Q96N19 417 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 FRMD6Q96NE9 622 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 KCNC2Q96PR1 638 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 LYRM4Q9HD34 91 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 KLHL1Q9NR64 748 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 IGSF5Q9NSI5 407 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 ZDHHC18Q9NUE0 388 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 ACOT9Q9Y305 439 aa16.58■□□□□ 0.24
HDDC3-201ENST00000330334 SYCE1LA8MT33 242 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 K7EPI3 171 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 NME2P1O60361 137 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 CCNT2O60583 730 aaKnown RBP16.57■□□□□ 0.24
HDDC3-201ENST00000330334 CTNSO60931 367 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 SLC25A12O75746 678 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 MYO1DO94832 1006 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 NME2P22392 152 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 LIM2P55344 173 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 PMP22Q01453 160 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 SLMAPQ14BN4 828 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 FBXO48Q5FWF7 155 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 ZNF468Q5VIY5 522 aaPredicted RBP16.57■□□□□ 0.24
HDDC3-201ENST00000330334 GALNTL5Q7Z4T8 443 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 CMC1Q7Z7K0 106 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 ZNF227Q86WZ6 799 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 RELL1Q8IUW5 271 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 ZNF473Q8WTR7 871 aaKnown RBP16.57■□□□□ 0.24
HDDC3-201ENST00000330334 VMP1Q96GC9 406 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 TBCDQ9BTW9 1192 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 HES7Q9BYE0 225 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 ADAP2Q9NPF8 381 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 KCMF1Q9P0J7 381 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 ADGRE2Q9UHX3 823 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 ZNF835Q9Y2P0 537 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 ASB1Q9Y576 335 aa16.57■□□□□ 0.24
HDDC3-201ENST00000330334 A0A087X1B8 175 aa16.56■□□□□ 0.24
HDDC3-201ENST00000330334 A0A0G2JN53 185 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms