RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 CLRN1P58418 232 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 EXOC3L2Q2M3D2 409 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 MYLK3Q32MK0 819 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 GPR139Q6DWJ6 353 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 IGFN1Q86VF2 1251 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 OR51A7Q8NH64 312 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 TREX2Q9BQ50 279 aaPredicted RBP16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 WNT6Q9Y6F9 365 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 BCL9O00512 1426 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 FEZF1A0PJY2 475 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 HOXC6P09630 235 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 ZBTB48P10074 688 aaPredicted RBP16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 HSD17B12Q53GQ0 312 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 NPLOC4Q8TAT6 608 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 LRRC42Q9Y546 428 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 ZNF254O75437 659 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 SYN1P17600 705 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 MOGQ16653 247 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 SPIN4Q56A73 249 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 NLGN2Q8NFZ4 835 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 SERINC1Q9NRX5 453 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 ACTR3BQ9P1U1 418 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 NRP1O14786 923 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 LCKP06239 509 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 FKBP1AP62942 108 aaKnown RBP16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 GINS1Q14691 196 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 C18orf21Q32NC0 220 aaPredicted RBP16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 DBF4BQ8NFT6 615 aa16.22■□□□□ 0.19
TSPAN3-201ENST00000267970 HTR3EA5X5Y0 456 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 USP2O75604 605 aaPredicted RBP16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 HLA-DPB1P04440 258 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 GATMP50440 423 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 GRM2Q14416 872 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 MFSD13AQ14CX5 517 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 ARHGAP40Q5TG30 622 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 CEACAM19Q7Z692 300 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 TXNDC5Q8NBS9 432 aaKnown RBP16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 C3orf58Q8NDZ4 430 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 C9orf43Q8TAL5 461 aaPredicted RBP16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 NEIL3Q8TAT5 605 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 C1orf21Q9H246 121 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 LYPLA2O95372 231 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 GDI1P31150 447 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 IRF5Q13568 498 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 PTGR1Q14914 329 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 TMEM53Q6P2H8 277 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 MEX3DQ86XN8 651 aaKnown RBP16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.21■□□□□ 0.191e-7■■■□□ 17.5
TSPAN3-201ENST00000267970 CMTM7Q96FZ5 175 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 PEBP4Q96S96 227 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 HDHD5Q9BXW7 423 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 SRA1Q9HD15 236 aaKnown RBP16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 IRAK2O43187 625 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 PRICKLE3O43900 615 aaPredicted RBP16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 DHPSP49366 369 aaPredicted RBP16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 LAS2Q8IYD9 372 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 HCAR2Q8TDS4 363 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 USP29Q9HBJ7 922 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 DLGAP4Q9Y2H0 992 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 ILVBLA1L0T0 632 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 NUPL2O15504 423 aaKnown RBP16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 DFNA5O60443 496 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 RAD1O60671 282 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 STSP08842 583 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 TREML1Q86YW5 311 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 SLC7A5P1Q8MH63 180 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 Q8N402 240 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 ERVK-19Q9WJR5 959 aa16.21■□□□□ 0.19
TSPAN3-201ENST00000267970 A0A1B0GVI7 797 aa16.21■□□□□ 0.18
TSPAN3-201ENST00000267970 RCBTB2O95199 551 aa16.21■□□□□ 0.18
TSPAN3-201ENST00000267970 LEPRP48357 1165 aaKnown RBP16.21■□□□□ 0.18
TSPAN3-201ENST00000267970 ST3GAL3Q11203 375 aa16.21■□□□□ 0.18
TSPAN3-201ENST00000267970 GPR157Q5UAW9 335 aa16.21■□□□□ 0.18
TSPAN3-201ENST00000267970 FKBP1CQ5VVH2 108 aa16.21■□□□□ 0.18
TSPAN3-201ENST00000267970 LMX1AQ8TE12 382 aa16.21■□□□□ 0.18
TSPAN3-201ENST00000267970 OR8D2Q9GZM6 311 aa16.21■□□□□ 0.18
TSPAN3-201ENST00000267970 A0A1B0GVC2 190 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 DUXAA6NLW8 204 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 H7BY64 318 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 POLR2CP19387 275 aaPredicted RBP16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 GALK2Q01415 458 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 ZNF616Q08AN1 781 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 ZNF678Q5SXM1 525 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 NPAS3Q8IXF0 933 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 ZNF283Q8N7M2 679 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 PRAP1Q96NZ9 151 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 MINDY3Q9H8M7 445 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 PAK1IP1Q9NWT1 392 aaPredicted RBP16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 ZIM2Q9NZV7 527 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 DISP2A7MBM2 1401 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 SSX4O60224 188 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 SRPRAP08240 638 aaKnown RBP16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 ATP5A1P25705 553 aaKnown RBP16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 SGCAQ16586 387 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 KLBQ86Z14 1044 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 STK35Q8TDR2 534 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 IFT52Q9Y366 437 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 LRRN3E7EW58 273 aa16.2■□□□□ 0.18
TSPAN3-201ENST00000267970 CAPN5O15484 640 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms