RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 EVA1BQ9NVM1 165 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 PILRAQ9UKJ1 303 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 CORO2BQ9UQ03 480 aa17.26■□□□□ 0.35
VIM-201ENST00000224237 TCRBV5S2A0A599 114 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 C1orf226A1L170 272 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 LILRA5A6NI73 299 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 C4orf51C9J302 202 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 GSTA4O15217 222 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 CTSVO60911 334 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 UBXN7O94888 489 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 UMPSP11172 480 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 ENGP17813 658 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 POLE2P56282 527 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 HBA1P69905 142 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 TAF11Q15544 211 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 LYSMD4Q5XG99 296 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 GPR155Q7Z3F1 870 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 C11orf74Q86VG3 221 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 C17orf82Q86X59 251 aaPredicted RBP17.25■□□□□ 0.35
VIM-201ENST00000224237 MICU2Q8IYU8 434 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 MMP21Q8N119 569 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 TRIML2Q8N7C3 387 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 SLCO4A1Q96BD0 722 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 TM4SF19Q96DZ7 209 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 GORASP2Q9H8Y8 452 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 ERVMER34-1Q9H9K5 563 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 TPT1P8Q9HAU6 139 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 CCM2LQ9NUG4 571 aaPredicted RBP17.25■□□□□ 0.35
VIM-201ENST00000224237 ARMC1Q9NVT9 282 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 RIMS3Q9UJD0 308 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 POMT2Q9UKY4 750 aa17.25■□□□□ 0.35
VIM-201ENST00000224237 A0A0J9YVX5 310 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 LAMTOR5O43504 91 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 GUCY1B2O75343 617 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 C6orf47O95873 294 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 FAM58BPP0C7Q3 252 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 DRD2P14416 443 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 TYRP1P17643 537 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 GPX2P18283 190 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 ATP5A1P25705 553 aaKnown RBP17.24■□□□□ 0.35
VIM-201ENST00000224237 LSSP48449 732 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 ALDH9A1P49189 494 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 GZMMP51124 257 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 CSTF1Q05048 431 aaKnown RBP17.24■□□□□ 0.35
VIM-201ENST00000224237 SLC14A1Q13336 389 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 CYP51A1Q16850 503 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 RNF44Q7L0R7 432 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 AMER3Q8N944 861 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 ACOT4Q8N9L9 421 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 CAMKVQ8NCB2 501 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 OR8K5Q8NH50 307 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 NAF1Q96HR8 494 aaKnown RBP17.24■□□□□ 0.35
VIM-201ENST00000224237 SLC38A3Q99624 504 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 FAIM2Q9BWQ8 316 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 TEX10Q9NXF1 929 aaPredicted RBP17.24■□□□□ 0.35
VIM-201ENST00000224237 VPS13AQ96RL7 3174 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 A0A1B0GVT2 93 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 A0A1W2PRB8 838 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 URADA6NGE7 173 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 ABCB1P08183 1280 aaPredicted RBP17.24■□□□□ 0.35
VIM-201ENST00000224237 IL10P22301 178 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 SLAMF1Q13291 335 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 GAB1Q13480 694 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 TRIP10Q15642 601 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 DEFB133Q30KQ1 61 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 OGFOD3Q6PK18 319 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 C10orf111Q8N326 155 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 ZFP90Q8TF47 636 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 FIG4Q92562 907 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 RERGQ96A58 199 aaPredicted RBP17.24■□□□□ 0.35
VIM-201ENST00000224237 ZNF570Q96NI8 536 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 KLHL25Q9H0H3 589 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 UCKL1Q9NWZ5 548 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 TAS2R9Q9NYW1 312 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 EHD3Q9NZN3 535 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 AURKCQ9UQB9 309 aa17.24■□□□□ 0.35
VIM-201ENST00000224237 A0A1B0GTW7 788 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 SCELO95171 688 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 PVRP15151 417 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 GNSP15586 552 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 CAPZBP47756 277 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 DHPSP49366 369 aaPredicted RBP17.23■□□□□ 0.35
VIM-201ENST00000224237 RAB8AP61006 207 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 NDUFAF5Q5TEU4 345 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 PMS2CLQ68D20 193 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 MRM1Q6IN84 353 aaKnown RBP17.23■□□□□ 0.35
VIM-201ENST00000224237 ADGRG5Q8IZF4 528 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 LILRA2Q8N149 483 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 ZNF655Q8N720 491 aaPredicted RBP17.23■□□□□ 0.35
VIM-201ENST00000224237 TMEM105Q8N8V8 129 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 KCT2Q8NC54 265 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 OR52E4Q8NGH9 312 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 PKP2Q99959 881 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 SPATA9Q9BWV2 254 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 ROGDIQ9GZN7 287 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 SEMA6CQ9H3T2 930 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 MYO15AQ9UKN7 3530 aa17.23■□□□□ 0.35
VIM-201ENST00000224237 CXCR6O00574 342 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 PDPK1O15530 556 aa17.22■□□□□ 0.35
VIM-201ENST00000224237 CERS1P27544 350 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms