RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 HIST1H1TP22492 207 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 PTPN4P29074 926 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 CPOXP36551 454 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 SSR2P43308 183 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 GSTM5P46439 218 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 MNAT1P51948 309 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 PLA2G16P53816 162 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 HSD11B2P80365 405 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 TGM3Q08188 693 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 STX5Q13190 355 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 TLR1Q15399 786 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 COQ5Q5HYK3 327 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 WASHC2DQ5SRD0 308 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 CCNYL2Q5T2Q4 361 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 TRIM40Q6P9F5 258 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 PRR23CQ6ZRP0 262 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 RINLQ6ZS11 566 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 RIPOR1Q6ZS17 1223 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 IKBIPQ70UQ0 350 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 RETREG3Q86VR2 466 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 NAXDQ8IW45 347 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 ZCCHC7Q8N3Z6 543 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 TM4SF18Q96CE8 201 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 RCN3Q96D15 328 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 SPDL1Q96EA4 605 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 ZBTB18Q99592 522 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 ROGDIQ9GZN7 287 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 LRMDAQ9H2I8 198 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 SOHLH2Q9NX45 425 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 NCDNQ9UBB6 729 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 FTSJ1Q9UET6 329 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 ATP6V1HQ9UI12 483 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 MAPRE3Q9UPY8 281 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 MRPS2Q9Y399 296 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 DMDP11532 3685 aa14.01□□□□□ -0.17
SHKBP1-211ENST00000595945 A0A0G2JN53 185 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 IGHV5-10-1A0A0J9YXX1 117 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 A0A1W2PP18 115 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 FITM1A5D6W6 292 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 B2RBV5 119 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 SCAMP2O15127 329 aaKnown RBP14□□□□□ -0.17
SHKBP1-211ENST00000595945 HNRNPH2P55795 449 aaKnown RBP14□□□□□ -0.17
SHKBP1-211ENST00000595945 KCNK10P57789 538 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 TAS2R50P59544 299 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 RAB8AP61006 207 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 PDE7AQ13946 482 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 UGT8Q16880 541 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 VPS26BQ4G0F5 336 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 REP15Q6BDI9 236 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 ABHD13Q7L211 337 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 CAMKMTQ7Z624 323 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 SLITRK4Q8IW52 837 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 STARD8Q92502 1023 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 NLNQ9BYT8 704 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 C1orf21Q9H246 121 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 ACTR5Q9H9F9 607 aaPredicted RBP14□□□□□ -0.17
SHKBP1-211ENST00000595945 TAS2R1Q9NYW7 299 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 NDUFAF1Q9Y375 327 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 SLC22A7Q9Y694 548 aa14□□□□□ -0.17
SHKBP1-211ENST00000595945 C4orf47A7E2U8 309 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 D6RAR5 112 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 PROB1E7EW31 1015 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 CFLARO15519 480 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 AKAP10O43572 662 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 TBX19O60806 448 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 LRATO95237 230 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 B3GALT4O96024 378 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 EIF2S1P05198 315 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 IL6P05231 212 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 IL3P08700 152 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 ALOX12P18054 663 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 ITGAXP20702 1163 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 CERS1P27544 350 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 HPCAL1P37235 193 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 GCGRP47871 477 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 SEPHS1P49903 392 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 RASSF2P50749 326 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 DGKQP52824 942 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 MAPK12P53778 367 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 EMP3P54852 163 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 PHC1P78364 1004 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 BTN3A2P78410 334 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 SRSF11Q05519 484 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 KLC1Q07866 573 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 DPY19L1Q2PZI1 675 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 FAM174BQ3ZCQ3 159 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 TCTE1Q5JU00 501 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 SPANXN4Q5MJ08 99 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 SNAP47Q5SQN1 464 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 HACD2Q6Y1H2 254 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 MSANTD1Q6ZTZ1 278 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 ACOT4Q8N9L9 421 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 RBM15BQ8NDT2 890 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 OR8K5Q8NH50 307 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 ZCCHC10Q8TBK6 192 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 VPS33AQ96AX1 596 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 COQ8BQ96D53 544 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 MTERF3Q96E29 417 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 ZNF764Q96H86 408 aaPredicted RBP13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 C10orf90Q96M02 699 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 302.2 ms