RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 TREX1Q9NSU2 369 aa9.91□□□□□ -0.82
RANBP3-230ENST00000593025 ALKBH4Q9NXW9 302 aa9.91□□□□□ -0.82
RANBP3-230ENST00000593025 FOXD3Q9UJU5 478 aaPredicted RBP9.91□□□□□ -0.82
RANBP3-230ENST00000593025 TFR2Q9UP52 801 aa9.91□□□□□ -0.82
RANBP3-230ENST00000593025 ERVK-11Q9UQG0 969 aa9.91□□□□□ -0.82
RANBP3-230ENST00000593025 MED16Q9Y2X0 877 aa9.91□□□□□ -0.82
RANBP3-230ENST00000593025 YARS2Q9Y2Z4 477 aaKnown RBP9.91□□□□□ -0.82
RANBP3-230ENST00000593025 PCDHA3Q9Y5H8 950 aa9.91□□□□□ -0.82
RANBP3-230ENST00000593025 GTF3C3Q9Y5Q9 886 aa9.91□□□□□ -0.82
RANBP3-230ENST00000593025 CLDN4O14493 209 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 HCN1O60741 890 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 F12P00748 615 aaPredicted RBP9.9□□□□□ -0.82
RANBP3-230ENST00000593025 RFPL3SP0C7P2 107 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 GABRA1P14867 456 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 CNR1P21554 472 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 JAK1P23458 1154 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 COPS2P61201 443 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 TBPL1P62380 186 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 PRAMEP78395 509 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 TRIM14Q14142 442 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 RPS6KA1Q15418 735 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 TERF2Q15554 542 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 P3H1Q32P28 736 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 CAPN13Q6MZZ7 669 aaPredicted RBP9.9□□□□□ -0.82
RANBP3-230ENST00000593025 HMBOX1Q6NT76 420 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 GK5Q6ZS86 529 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 GPALPP1Q8IXQ4 340 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 MFSD9Q8NBP5 474 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 SREK1Q8WXA9 508 aaKnown RBP9.9□□□□□ -0.82
RANBP3-230ENST00000593025 SMPDL3BQ92485 455 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 NCLNQ969V3 563 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 VMP1Q96GC9 406 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 MRFAP1L1Q96HT8 127 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 PDLIM2Q96JY6 352 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 DOCK7Q96N67 2140 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 FAM173AQ9BQD7 235 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 YIPF4Q9BSR8 244 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 AICDAQ9GZX7 198 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 NAT10Q9H0A0 1025 aaKnown RBP9.9□□□□□ -0.82
RANBP3-230ENST00000593025 SLC6A15Q9H2J7 730 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 ZNF703Q9H7S9 590 aaPredicted RBP9.9□□□□□ -0.82
RANBP3-230ENST00000593025 PRDM9Q9NQV7 894 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 ZFATQ9P243 1243 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 MYOTQ9UBF9 498 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 ZNF629Q9UEG4 869 aaPredicted RBP9.9□□□□□ -0.82
RANBP3-230ENST00000593025 MTRF1LQ9UGC7 380 aaKnown RBP9.9□□□□□ -0.82
RANBP3-230ENST00000593025 PCDHGB3Q9Y5G1 929 aa9.9□□□□□ -0.82
RANBP3-230ENST00000593025 CR1P17927 2039 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 TRGV5A0A0B4J1U4 118 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 LRRC3CA6NJW4 275 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 A8MVJ9 347 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 GFYI3L273 518 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 CNOT4O95628 575 aaKnown RBP9.89□□□□□ -0.83
RANBP3-230ENST00000593025 EPPINO95925 133 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 CATP04040 527 aaKnown RBP9.89□□□□□ -0.83
RANBP3-230ENST00000593025 F7P08709 466 aaPredicted RBP9.89□□□□□ -0.83
RANBP3-230ENST00000593025 ZNF888P0CJ79 500 aaPredicted RBP9.89□□□□□ -0.83
RANBP3-230ENST00000593025 CCL3P10147 92 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 NID1P14543 1247 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 ALOX12P18054 663 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 FMO4P31512 558 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 CTNNA1P35221 906 aaKnown RBP9.89□□□□□ -0.83
RANBP3-230ENST00000593025 PPARGP37231 505 aaPredicted RBP9.89□□□□□ -0.83
RANBP3-230ENST00000593025 CLCN7P51798 805 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 AGFG1P52594 562 aaKnown RBP9.89□□□□□ -0.83
RANBP3-230ENST00000593025 MEF2AQ02078 507 aaPredicted RBP9.89□□□□□ -0.83
RANBP3-230ENST00000593025 HERC3Q15034 1050 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 C11orf63Q6NUN7 778 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 CYHR1Q6ZMK1 362 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 LINC00523Q86TU6 105 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 SCUBE1Q8IWY4 988 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 MPP5Q8N3R9 675 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 FBXW8Q8N3Y1 598 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 TMEM52Q8NDY8 209 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 OR8K1Q8NGG5 319 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 SLC35B2Q8TB61 432 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 IGFBPL1Q8WX77 278 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 ASB11Q8WXH4 323 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 ASB15Q8WXK1 588 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 ALG3Q92685 438 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 PEX13Q92968 403 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 PERPQ96FX8 193 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 SPNS1Q9H2V7 528 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 NHEJ1Q9H9Q4 299 aaPredicted RBP9.89□□□□□ -0.83
RANBP3-230ENST00000593025 SH2D2AQ9NP31 389 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 HPF1Q9NWY4 346 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 INTUQ9ULD6 942 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 ATG4BQ9Y4P1 393 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.89□□□□□ -0.836e-6■□□□□ 9.8
RANBP3-230ENST00000593025 FREM3P0C091 2139 aa9.89□□□□□ -0.83
RANBP3-230ENST00000593025 ZNF839A8K0R7 811 aa9.88□□□□□ -0.83
RANBP3-230ENST00000593025 WWP2O00308 870 aa9.88□□□□□ -0.83
RANBP3-230ENST00000593025 PSMD3O43242 534 aa9.88□□□□□ -0.83
RANBP3-230ENST00000593025 CEP104O60308 925 aa9.88□□□□□ -0.83
RANBP3-230ENST00000593025 NDUFS3O75489 264 aa9.88□□□□□ -0.83
RANBP3-230ENST00000593025 SYF2O95926 243 aaKnown RBP9.88□□□□□ -0.83
RANBP3-230ENST00000593025 CDH1P12830 882 aa9.88□□□□□ -0.83
RANBP3-230ENST00000593025 HRH2P25021 359 aa9.88□□□□□ -0.83
RANBP3-230ENST00000593025 NMBRP28336 390 aa9.88□□□□□ -0.83
RANBP3-230ENST00000593025 TIMP3P35625 211 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms