RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 LTBQ06643 244 aa16.18■□□□□ 0.18
RETREG3-210ENST00000590541 ILF2Q12905 390 aaKnown RBP16.18■□□□□ 0.18
RETREG3-210ENST00000590541 MSS51Q4VC12 460 aa16.18■□□□□ 0.18
RETREG3-210ENST00000590541 THEMIS2Q5TEJ8 643 aa16.18■□□□□ 0.18
RETREG3-210ENST00000590541 ACAD11Q709F0 780 aa16.18■□□□□ 0.18
RETREG3-210ENST00000590541 UBE2R2Q712K3 238 aaPredicted RBP16.18■□□□□ 0.18
RETREG3-210ENST00000590541 SPNS2Q8IVW8 549 aa16.18■□□□□ 0.18
RETREG3-210ENST00000590541 ARMC10Q8N2F6 343 aa16.18■□□□□ 0.18
RETREG3-210ENST00000590541 SNF8Q96H20 258 aa16.18■□□□□ 0.18
RETREG3-210ENST00000590541 PCBD2Q9H0N5 130 aa16.18■□□□□ 0.18
RETREG3-210ENST00000590541 PLEKHA6Q9Y2H5 1048 aa16.18■□□□□ 0.18
RETREG3-210ENST00000590541 AKAP6Q13023 2319 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 FEZF1A0PJY2 475 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 LCMT2O60294 686 aaKnown RBP16.17■□□□□ 0.18
RETREG3-210ENST00000590541 DNAJB6O75190 326 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 AHSGP02765 367 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 CCND1P24385 295 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 IMPA1P29218 277 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 GPR85P60893 370 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 CBLBQ13191 982 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 GXYLT1Q4G148 440 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 MDGA2Q7Z553 956 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 SLC26A11Q86WA9 606 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 CPNE9Q8IYJ1 553 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 MYO1HQ8N1T3 1032 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 CAMKVQ8NCB2 501 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 BBOF1Q8ND07 529 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 THAP11Q96EK4 314 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 ALPK1Q96QP1 1244 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 GPATCH1Q9BRR8 931 aaKnown RBP16.17■□□□□ 0.18
RETREG3-210ENST00000590541 DEFB127Q9H1M4 99 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 PARVBQ9HBI1 364 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 PPANQ9NQ55 473 aaKnown RBP16.17■□□□□ 0.18
RETREG3-210ENST00000590541 SLC22A7Q9Y694 548 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 TEX264Q9Y6I9 313 aa16.17■□□□□ 0.18
RETREG3-210ENST00000590541 FCHO1O14526 889 aa16.16■□□□□ 0.18
RETREG3-210ENST00000590541 SEC31AO94979 1220 aaKnown RBP16.16■□□□□ 0.18
RETREG3-210ENST00000590541 FHP07954 510 aa16.16■□□□□ 0.18
RETREG3-210ENST00000590541 ELK3P41970 407 aa16.16■□□□□ 0.18
RETREG3-210ENST00000590541 TEDDM1Q5T9Z0 273 aa16.16■□□□□ 0.18
RETREG3-210ENST00000590541 STEAP4Q687X5 459 aa16.16■□□□□ 0.18
RETREG3-210ENST00000590541 ASPGQ86U10 573 aa16.16■□□□□ 0.18
RETREG3-210ENST00000590541 ZZZ3Q8IYH5 903 aa16.16■□□□□ 0.18
RETREG3-210ENST00000590541 NFAM1Q8NET5 270 aaPredicted RBP16.16■□□□□ 0.18
RETREG3-210ENST00000590541 OR5M3Q8NGP4 307 aa16.16■□□□□ 0.18
RETREG3-210ENST00000590541 EEF1AKMT1Q8WVE0 214 aa16.16■□□□□ 0.18
RETREG3-210ENST00000590541 SLC13A3Q8WWT9 602 aa16.16■□□□□ 0.18
RETREG3-210ENST00000590541 SMR3AQ99954 134 aa16.16■□□□□ 0.18
RETREG3-210ENST00000590541 CLEC4MQ9H2X3 399 aaPredicted RBP16.16■□□□□ 0.18
RETREG3-210ENST00000590541 CCDC177Q9NQR7 707 aaPredicted RBP16.16■□□□□ 0.18
RETREG3-210ENST00000590541 RASSF1Q9NS23 344 aa16.16■□□□□ 0.18
RETREG3-210ENST00000590541 PNPLA3Q9NST1 481 aa16.16■□□□□ 0.18
RETREG3-210ENST00000590541 SH2B3Q9UQQ2 575 aa16.16■□□□□ 0.18
RETREG3-210ENST00000590541 PABPN1LA6NDY0 278 aaKnown RBP16.15■□□□□ 0.18
RETREG3-210ENST00000590541 SAGE2PA6NJ88 616 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 EFCAB8A8MWE9 144 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 NPIPA2E9PIF3 369 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 NPIPA3F8WFD2 350 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 BANF1O75531 89 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 HIST1H2AGP0C0S8 130 aaPredicted RBP16.15■□□□□ 0.18
RETREG3-210ENST00000590541 HIST1H2ADP20671 130 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 DNASE1P24855 282 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 GABRB3P28472 473 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 IL2P60568 153 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 SNTB1Q13884 538 aaKnown RBP16.15■□□□□ 0.18
RETREG3-210ENST00000590541 FAM45BPQ6NSW5 357 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 PAQR3Q6TCH7 311 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 ARSKQ6UWY0 536 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 Q71RC1 249 aaPredicted RBP16.15■□□□□ 0.18
RETREG3-210ENST00000590541 PIWIL4Q7Z3Z4 852 aaKnown RBP16.15■□□□□ 0.18
RETREG3-210ENST00000590541 LIX1LQ8IVB5 337 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 IGDCC3Q8IVU1 814 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 CYP4X1Q8N118 509 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 CYP4Z2PQ8N1L4 340 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 AFAP1L2Q8N4X5 818 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 MYRIPQ8NFW9 859 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 OR10Q1Q8NGQ4 319 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 FAM45AQ8TCE6 357 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 TBC1D20Q96BZ9 403 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 RMND5BQ96G75 393 aaPredicted RBP16.15■□□□□ 0.18
RETREG3-210ENST00000590541 HIST1H2AHQ96KK5 128 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 NDNQ99608 321 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 HIST1H2AJQ99878 128 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 TTYH2Q9BSA4 534 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 H2AFJQ9BTM1 129 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 TRIM54Q9BYV2 358 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 FAM129AQ9BZQ8 928 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 SLC6A16Q9GZN6 736 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 DEPPQ9NTK1 212 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 NSMCE4AQ9NXX6 385 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 PYCARDQ9ULZ3 195 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 CHMP2BQ9UQN3 213 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 VWA7Q9Y334 891 aa16.15■□□□□ 0.18
RETREG3-210ENST00000590541 FLNAP21333 2647 aaKnown RBP16.15■□□□□ 0.18
RETREG3-210ENST00000590541 F7P08709 466 aaPredicted RBP16.14■□□□□ 0.17
RETREG3-210ENST00000590541 ZFP36L2P47974 494 aaKnown RBP16.14■□□□□ 0.17
RETREG3-210ENST00000590541 AP1S2P56377 157 aa16.14■□□□□ 0.17
RETREG3-210ENST00000590541 OLR1P78380 273 aa16.14■□□□□ 0.17
RETREG3-210ENST00000590541 BTG2P78543 158 aa16.14■□□□□ 0.17
RETREG3-210ENST00000590541 TIAL1Q01085 375 aaKnown RBP eCLIP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms